Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EIF3EP60228 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EIF3EP60228 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
EIF3EP60228 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.12■□□□□ 0.81
EIF3EP60228 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
EIF3EP60228 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
EIF3EP60228 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.12■□□□□ 0.81
EIF3EP60228 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.12■□□□□ 0.81
EIF3EP60228 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
EIF3EP60228 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.12■□□□□ 0.81
EIF3EP60228 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.11■□□□□ 0.81
EIF3EP60228 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.11■□□□□ 0.81
EIF3EP60228 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EIF3EP60228 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.11■□□□□ 0.81
EIF3EP60228 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EIF3EP60228 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
EIF3EP60228 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.11■□□□□ 0.81
EIF3EP60228 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EIF3EP60228 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.11■□□□□ 0.81
EIF3EP60228 AC092666.2-201ENST00000613287 246 ntBASIC20.11■□□□□ 0.81
EIF3EP60228 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.11■□□□□ 0.81
EIF3EP60228 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
EIF3EP60228 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
EIF3EP60228 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EIF3EP60228 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
EIF3EP60228 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
EIF3EP60228 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
EIF3EP60228 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.1■□□□□ 0.81
EIF3EP60228 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.1■□□□□ 0.81
EIF3EP60228 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
EIF3EP60228 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
EIF3EP60228 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EIF3EP60228 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.1■□□□□ 0.81
EIF3EP60228 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EIF3EP60228 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EIF3EP60228 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
EIF3EP60228 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EIF3EP60228 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
EIF3EP60228 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EIF3EP60228 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.1■□□□□ 0.81
EIF3EP60228 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.1■□□□□ 0.81
EIF3EP60228 PNMA6B-201ENST00000538162 1200 ntBASIC20.1■□□□□ 0.81
EIF3EP60228 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.1■□□□□ 0.81
EIF3EP60228 AC060766.5-201ENST00000590539 871 ntBASIC20.1■□□□□ 0.81
EIF3EP60228 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.1■□□□□ 0.81
EIF3EP60228 AC083880.1-201ENST00000608266 535 ntBASIC20.1■□□□□ 0.81
EIF3EP60228 AL109923.1-201ENST00000618799 583 ntBASIC20.1■□□□□ 0.81
EIF3EP60228 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
EIF3EP60228 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EIF3EP60228 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EIF3EP60228 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.1■□□□□ 0.81
EIF3EP60228 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EIF3EP60228 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EIF3EP60228 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
EIF3EP60228 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.1■□□□□ 0.81
EIF3EP60228 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EIF3EP60228 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EIF3EP60228 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.09■□□□□ 0.81
EIF3EP60228 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EIF3EP60228 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
EIF3EP60228 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
EIF3EP60228 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
EIF3EP60228 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
EIF3EP60228 TNXA-203ENST00000507684 2038 ntBASIC20.09■□□□□ 0.81
EIF3EP60228 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EIF3EP60228 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
EIF3EP60228 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EIF3EP60228 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
EIF3EP60228 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
EIF3EP60228 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.09■□□□□ 0.81
EIF3EP60228 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EIF3EP60228 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.09■□□□□ 0.81
EIF3EP60228 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.09■□□□□ 0.81
EIF3EP60228 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
EIF3EP60228 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
EIF3EP60228 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EIF3EP60228 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
EIF3EP60228 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EIF3EP60228 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
EIF3EP60228 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
EIF3EP60228 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
EIF3EP60228 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.08■□□□□ 0.81
EIF3EP60228 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EIF3EP60228 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EIF3EP60228 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.08■□□□□ 0.81
EIF3EP60228 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
EIF3EP60228 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EIF3EP60228 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
EIF3EP60228 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
EIF3EP60228 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
EIF3EP60228 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
EIF3EP60228 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EIF3EP60228 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EIF3EP60228 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
EIF3EP60228 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
EIF3EP60228 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.08■□□□□ 0.81
EIF3EP60228 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.08■□□□□ 0.81
EIF3EP60228 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.08■□□□□ 0.81
EIF3EP60228 AL121906.2-201ENST00000621597 723 ntBASIC20.08■□□□□ 0.81
EIF3EP60228 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms