Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GDNFP39905 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GDNFP39905 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GDNFP39905 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.96■□□□□ 0.31
GDNFP39905 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC16.96■□□□□ 0.31
GDNFP39905 AL390961.4-201ENST00000623958 2535 ntBASIC16.96■□□□□ 0.31
GDNFP39905 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.96■□□□□ 0.31
GDNFP39905 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.96■□□□□ 0.31
GDNFP39905 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.96■□□□□ 0.31
GDNFP39905 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
GDNFP39905 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
GDNFP39905 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
GDNFP39905 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.96■□□□□ 0.31
GDNFP39905 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.96■□□□□ 0.31
GDNFP39905 AC010536.3-201ENST00000620306 533 ntBASIC16.96■□□□□ 0.31
GDNFP39905 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
GDNFP39905 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GDNFP39905 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GDNFP39905 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GDNFP39905 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GDNFP39905 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
GDNFP39905 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GDNFP39905 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GDNFP39905 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
GDNFP39905 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GDNFP39905 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.96■□□□□ 0.3
GDNFP39905 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.96■□□□□ 0.3
GDNFP39905 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
GDNFP39905 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.96■□□□□ 0.3
GDNFP39905 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GDNFP39905 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
GDNFP39905 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.95■□□□□ 0.3
GDNFP39905 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GDNFP39905 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDNFP39905 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDNFP39905 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDNFP39905 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDNFP39905 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.95■□□□□ 0.3
GDNFP39905 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
GDNFP39905 AC092437.1-201ENST00000624794 1048 ntBASIC16.95■□□□□ 0.3
GDNFP39905 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDNFP39905 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDNFP39905 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
GDNFP39905 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDNFP39905 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDNFP39905 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.94■□□□□ 0.3
GDNFP39905 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
GDNFP39905 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.94■□□□□ 0.3
GDNFP39905 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDNFP39905 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC16.94■□□□□ 0.3
GDNFP39905 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
GDNFP39905 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
GDNFP39905 TERF1P5-201ENST00000477545 1207 ntBASIC16.94■□□□□ 0.3
GDNFP39905 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
GDNFP39905 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.94■□□□□ 0.3
GDNFP39905 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.94■□□□□ 0.3
GDNFP39905 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GDNFP39905 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
GDNFP39905 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDNFP39905 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDNFP39905 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
GDNFP39905 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDNFP39905 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.94■□□□□ 0.3
GDNFP39905 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.94■□□□□ 0.3
GDNFP39905 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDNFP39905 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.94■□□□□ 0.3
GDNFP39905 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.94■□□□□ 0.3
GDNFP39905 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GDNFP39905 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDNFP39905 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GDNFP39905 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.93■□□□□ 0.3
GDNFP39905 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GDNFP39905 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GDNFP39905 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GDNFP39905 HCG11-201ENST00000411553 5696 ntBASIC16.93■□□□□ 0.3
GDNFP39905 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.93■□□□□ 0.3
GDNFP39905 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.93■□□□□ 0.3
GDNFP39905 KRT18P11-201ENST00000435214 1283 ntBASIC16.93■□□□□ 0.3
GDNFP39905 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.93■□□□□ 0.3
GDNFP39905 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.93■□□□□ 0.3
GDNFP39905 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GDNFP39905 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GDNFP39905 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms