Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRCC1P18887 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRCC1P18887 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.44■□□□□ 0.7
XRCC1P18887 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.44■□□□□ 0.7
XRCC1P18887 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.44■□□□□ 0.7
XRCC1P18887 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
XRCC1P18887 PRKY-204ENST00000533551 1019 ntBASIC19.44■□□□□ 0.7
XRCC1P18887 AC124016.1-201ENST00000609552 612 ntBASIC19.44■□□□□ 0.7
XRCC1P18887 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.44■□□□□ 0.7
XRCC1P18887 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRCC1P18887 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRCC1P18887 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRCC1P18887 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.44■□□□□ 0.7
XRCC1P18887 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.44■□□□□ 0.7
XRCC1P18887 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.44■□□□□ 0.7
XRCC1P18887 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
XRCC1P18887 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC1P18887 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.43■□□□□ 0.7
XRCC1P18887 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
XRCC1P18887 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
XRCC1P18887 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC1P18887 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC19.43■□□□□ 0.7
XRCC1P18887 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC1P18887 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.43■□□□□ 0.7
XRCC1P18887 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC1P18887 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
XRCC1P18887 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC1P18887 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC1P18887 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC1P18887 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC1P18887 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
XRCC1P18887 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.43■□□□□ 0.7
XRCC1P18887 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.43■□□□□ 0.7
XRCC1P18887 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.43■□□□□ 0.7
XRCC1P18887 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.43■□□□□ 0.7
XRCC1P18887 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.43■□□□□ 0.7
XRCC1P18887 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
XRCC1P18887 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC1P18887 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
XRCC1P18887 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC1P18887 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.43■□□□□ 0.7
XRCC1P18887 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC1P18887 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC1P18887 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC1P18887 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
XRCC1P18887 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.42■□□□□ 0.7
XRCC1P18887 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.42■□□□□ 0.7
XRCC1P18887 AC239809.2-201ENST00000415381 517 ntBASIC19.42■□□□□ 0.7
XRCC1P18887 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.42■□□□□ 0.7
XRCC1P18887 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.42■□□□□ 0.7
XRCC1P18887 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.42■□□□□ 0.7
XRCC1P18887 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.42■□□□□ 0.7
XRCC1P18887 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.42■□□□□ 0.7
XRCC1P18887 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.42■□□□□ 0.7
XRCC1P18887 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.42■□□□□ 0.7
XRCC1P18887 AC110285.5-201ENST00000611501 352 ntBASIC19.42■□□□□ 0.7
XRCC1P18887 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
XRCC1P18887 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
XRCC1P18887 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.42■□□□□ 0.7
XRCC1P18887 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.42■□□□□ 0.7
XRCC1P18887 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
XRCC1P18887 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
XRCC1P18887 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC1P18887 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.41■□□□□ 0.7
XRCC1P18887 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC1P18887 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.41■□□□□ 0.7
XRCC1P18887 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.41■□□□□ 0.7
XRCC1P18887 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC1P18887 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC1P18887 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC1P18887 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.41■□□□□ 0.7
XRCC1P18887 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
XRCC1P18887 RPS2P4-201ENST00000476944 856 ntBASIC19.41■□□□□ 0.7
XRCC1P18887 AC008550.1-201ENST00000511500 884 ntBASIC19.41■□□□□ 0.7
XRCC1P18887 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC1P18887 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC1P18887 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC1P18887 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC1P18887 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.41■□□□□ 0.7
XRCC1P18887 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
XRCC1P18887 AC124283.5-201ENST00000624661 1809 ntBASIC19.41■□□□□ 0.7
XRCC1P18887 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms