Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HNRNPCL4P0DMR1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 RPS2P52-201ENST00000469610 820 ntBASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 HLA-B-256ENST00000639848 1089 ntBASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HNRNPCL4P0DMR1 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HNRNPCL4P0DMR1 AC092368.3-202ENST00000574180 1591 ntBASIC18.08■□□□□ 0.49
HNRNPCL4P0DMR1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HNRNPCL4P0DMR1 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
HNRNPCL4P0DMR1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
HNRNPCL4P0DMR1 TNXA-203ENST00000507684 2038 ntBASIC18.08■□□□□ 0.49
HNRNPCL4P0DMR1 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.08■□□□□ 0.49
HNRNPCL4P0DMR1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
HNRNPCL4P0DMR1 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.08■□□□□ 0.49
HNRNPCL4P0DMR1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HNRNPCL4P0DMR1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HNRNPCL4P0DMR1 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.08■□□□□ 0.48
HNRNPCL4P0DMR1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.08■□□□□ 0.48
HNRNPCL4P0DMR1 MYC-209ENST00000641252 345 ntBASIC18.08■□□□□ 0.48
HNRNPCL4P0DMR1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HNRNPCL4P0DMR1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HNRNPCL4P0DMR1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
HNRNPCL4P0DMR1 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HNRNPCL4P0DMR1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.08■□□□□ 0.48
HNRNPCL4P0DMR1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.08■□□□□ 0.48
HNRNPCL4P0DMR1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HNRNPCL4P0DMR1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HNRNPCL4P0DMR1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 LINC01465-201ENST00000408887 1940 ntBASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HNRNPCL4P0DMR1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms