Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.53■□□□□ 0.72
APOA4P06727 RNA5SP413-201ENST00000516373 109 ntBASIC19.53■□□□□ 0.72
APOA4P06727 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
APOA4P06727 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.53■□□□□ 0.72
APOA4P06727 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.53■□□□□ 0.72
APOA4P06727 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.53■□□□□ 0.72
APOA4P06727 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
APOA4P06727 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.52■□□□□ 0.72
APOA4P06727 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
APOA4P06727 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
APOA4P06727 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.52■□□□□ 0.72
APOA4P06727 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
APOA4P06727 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.52■□□□□ 0.72
APOA4P06727 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.52■□□□□ 0.72
APOA4P06727 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.52■□□□□ 0.72
APOA4P06727 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.52■□□□□ 0.72
APOA4P06727 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.52■□□□□ 0.72
APOA4P06727 SOX15-203ENST00000570788 1093 ntBASIC19.52■□□□□ 0.72
APOA4P06727 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.52■□□□□ 0.72
APOA4P06727 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
APOA4P06727 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
APOA4P06727 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.52■□□□□ 0.71
APOA4P06727 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
APOA4P06727 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.52■□□□□ 0.71
APOA4P06727 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
APOA4P06727 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.52■□□□□ 0.71
APOA4P06727 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.52■□□□□ 0.71
APOA4P06727 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
APOA4P06727 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.71
APOA4P06727 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
APOA4P06727 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
APOA4P06727 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
APOA4P06727 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
APOA4P06727 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.51■□□□□ 0.71
APOA4P06727 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
APOA4P06727 PHGDH-210ENST00000641115 1638 ntBASIC19.51■□□□□ 0.71
APOA4P06727 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APOA4P06727 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APOA4P06727 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
APOA4P06727 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APOA4P06727 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
APOA4P06727 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
APOA4P06727 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.51■□□□□ 0.71
APOA4P06727 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.51■□□□□ 0.71
APOA4P06727 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
APOA4P06727 KRT18P6-201ENST00000555540 1265 ntBASIC19.51■□□□□ 0.71
APOA4P06727 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.51■□□□□ 0.71
APOA4P06727 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.51■□□□□ 0.71
APOA4P06727 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.51■□□□□ 0.71
APOA4P06727 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APOA4P06727 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APOA4P06727 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
APOA4P06727 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
APOA4P06727 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APOA4P06727 AL032819.2-201ENST00000624543 2162 ntBASIC19.5■□□□□ 0.71
APOA4P06727 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
APOA4P06727 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.5■□□□□ 0.71
APOA4P06727 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.5■□□□□ 0.71
APOA4P06727 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
APOA4P06727 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APOA4P06727 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APOA4P06727 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
APOA4P06727 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APOA4P06727 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APOA4P06727 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.5■□□□□ 0.71
APOA4P06727 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.5■□□□□ 0.71
APOA4P06727 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.5■□□□□ 0.71
APOA4P06727 UNC93B5-201ENST00000530315 699 ntBASIC19.5■□□□□ 0.71
APOA4P06727 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.5■□□□□ 0.71
APOA4P06727 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.5■□□□□ 0.71
APOA4P06727 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
APOA4P06727 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
APOA4P06727 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
APOA4P06727 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.49■□□□□ 0.71
APOA4P06727 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms