Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC009237.3-201ENST00000393279 1427 ntBASIC17.03■□□□□ 0.32
UPK1BO75841 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.03■□□□□ 0.32
UPK1BO75841 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
UPK1BO75841 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.03■□□□□ 0.32
UPK1BO75841 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.03■□□□□ 0.32
UPK1BO75841 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.32
UPK1BO75841 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
UPK1BO75841 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
UPK1BO75841 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1BO75841 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.02■□□□□ 0.32
UPK1BO75841 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1BO75841 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
UPK1BO75841 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
UPK1BO75841 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1BO75841 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1BO75841 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1BO75841 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1BO75841 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.02■□□□□ 0.32
UPK1BO75841 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.02■□□□□ 0.32
UPK1BO75841 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.02■□□□□ 0.32
UPK1BO75841 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
UPK1BO75841 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPK1BO75841 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.31
UPK1BO75841 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
UPK1BO75841 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPK1BO75841 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
UPK1BO75841 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPK1BO75841 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
UPK1BO75841 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPK1BO75841 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
UPK1BO75841 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.02■□□□□ 0.31
UPK1BO75841 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
UPK1BO75841 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.01■□□□□ 0.31
UPK1BO75841 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
UPK1BO75841 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.01■□□□□ 0.31
UPK1BO75841 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.01■□□□□ 0.31
UPK1BO75841 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
UPK1BO75841 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.01■□□□□ 0.31
UPK1BO75841 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
UPK1BO75841 MTDHP2-201ENST00000601468 714 ntBASIC17.01■□□□□ 0.31
UPK1BO75841 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
UPK1BO75841 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.01■□□□□ 0.31
UPK1BO75841 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
UPK1BO75841 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.01■□□□□ 0.31
UPK1BO75841 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
UPK1BO75841 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
UPK1BO75841 AC073592.3-201ENST00000625118 1834 ntBASIC17■□□□□ 0.31
UPK1BO75841 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17■□□□□ 0.31
UPK1BO75841 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1BO75841 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1BO75841 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1BO75841 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1BO75841 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1BO75841 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
UPK1BO75841 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1BO75841 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
UPK1BO75841 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17■□□□□ 0.31
UPK1BO75841 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1BO75841 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1BO75841 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17■□□□□ 0.31
UPK1BO75841 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17■□□□□ 0.31
UPK1BO75841 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17■□□□□ 0.31
UPK1BO75841 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17■□□□□ 0.31
UPK1BO75841 AC099791.2-201ENST00000605725 427 ntBASIC17■□□□□ 0.31
UPK1BO75841 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1BO75841 RARRES2P11-201ENST00000635158 484 ntBASIC17■□□□□ 0.31
UPK1BO75841 AC126763.1-201ENST00000552015 2118 ntBASIC17■□□□□ 0.31
UPK1BO75841 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17■□□□□ 0.31
UPK1BO75841 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1BO75841 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
UPK1BO75841 AC116050.2-201ENST00000612102 1779 ntBASIC17■□□□□ 0.31
UPK1BO75841 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.99■□□□□ 0.31
UPK1BO75841 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.99■□□□□ 0.31
UPK1BO75841 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.99■□□□□ 0.31
UPK1BO75841 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.99■□□□□ 0.31
UPK1BO75841 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPK1BO75841 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.99■□□□□ 0.31
UPK1BO75841 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UPK1BO75841 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.99■□□□□ 0.31
UPK1BO75841 AC092028.1-203ENST00000608262 953 ntBASIC16.99■□□□□ 0.31
UPK1BO75841 TEX21P-204ENST00000641479 1693 ntBASIC16.99■□□□□ 0.31
UPK1BO75841 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms