Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
SSNA1O43805 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
SSNA1O43805 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSNA1O43805 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SSNA1O43805 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSNA1O43805 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SSNA1O43805 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SSNA1O43805 AC061975.6-201ENST00000579045 1553 ntBASIC16.61■□□□□ 0.25
SSNA1O43805 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSNA1O43805 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSNA1O43805 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSNA1O43805 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.61■□□□□ 0.25
SSNA1O43805 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SSNA1O43805 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSNA1O43805 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
SSNA1O43805 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSNA1O43805 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSNA1O43805 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SSNA1O43805 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSNA1O43805 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.61■□□□□ 0.25
SSNA1O43805 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSNA1O43805 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSNA1O43805 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSNA1O43805 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.6■□□□□ 0.25
SSNA1O43805 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSNA1O43805 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSNA1O43805 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
SSNA1O43805 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSNA1O43805 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSNA1O43805 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.6■□□□□ 0.25
SSNA1O43805 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SSNA1O43805 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SSNA1O43805 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSNA1O43805 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.6■□□□□ 0.25
SSNA1O43805 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC16.6■□□□□ 0.25
SSNA1O43805 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.6■□□□□ 0.25
SSNA1O43805 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC16.6■□□□□ 0.25
SSNA1O43805 KRT125P-201ENST00000546827 989 ntBASIC16.6■□□□□ 0.25
SSNA1O43805 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.6■□□□□ 0.25
SSNA1O43805 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.6■□□□□ 0.25
SSNA1O43805 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
SSNA1O43805 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSNA1O43805 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSNA1O43805 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.6■□□□□ 0.25
SSNA1O43805 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSNA1O43805 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSNA1O43805 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.6■□□□□ 0.25
SSNA1O43805 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSNA1O43805 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSNA1O43805 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSNA1O43805 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
SSNA1O43805 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SSNA1O43805 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.59■□□□□ 0.25
SSNA1O43805 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.59■□□□□ 0.25
SSNA1O43805 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.59■□□□□ 0.25
SSNA1O43805 PKD1P5-201ENST00000532415 10291 ntBASIC16.59■□□□□ 0.25
SSNA1O43805 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SSNA1O43805 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SSNA1O43805 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SSNA1O43805 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SSNA1O43805 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.59■□□□□ 0.25
SSNA1O43805 AL161938.1-201ENST00000569833 2180 ntBASIC16.59■□□□□ 0.25
SSNA1O43805 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SSNA1O43805 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC16.59■□□□□ 0.25
SSNA1O43805 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.59■□□□□ 0.25
SSNA1O43805 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC16.59■□□□□ 0.25
SSNA1O43805 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.59■□□□□ 0.25
SSNA1O43805 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSNA1O43805 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SSNA1O43805 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSNA1O43805 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SSNA1O43805 OR6D1P-203ENST00000641209 4860 ntBASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms