Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF9O43307 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
ARHGEF9O43307 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.04■□□□□ 0.48
ARHGEF9O43307 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ARHGEF9O43307 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF9O43307 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF9O43307 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
ARHGEF9O43307 TCF3P1-201ENST00000423021 1937 ntBASIC18.04■□□□□ 0.48
ARHGEF9O43307 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF9O43307 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
ARHGEF9O43307 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF9O43307 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF9O43307 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.04■□□□□ 0.48
ARHGEF9O43307 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.04■□□□□ 0.48
ARHGEF9O43307 AL162412.1-201ENST00000567129 965 ntBASIC18.04■□□□□ 0.48
ARHGEF9O43307 AC092118.2-201ENST00000613495 667 ntBASIC18.04■□□□□ 0.48
ARHGEF9O43307 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF9O43307 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF9O43307 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF9O43307 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
ARHGEF9O43307 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
ARHGEF9O43307 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF9O43307 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF9O43307 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ARHGEF9O43307 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF9O43307 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF9O43307 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF9O43307 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF9O43307 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF9O43307 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF9O43307 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 AL512625.2-201ENST00000417533 625 ntBASIC18.03■□□□□ 0.48
ARHGEF9O43307 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 CYP2T1P-201ENST00000432607 1285 ntBASIC18.03■□□□□ 0.48
ARHGEF9O43307 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 PLLP-204ENST00000569059 665 ntTSL 3 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF9O43307 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF9O43307 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF9O43307 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF9O43307 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF9O43307 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF9O43307 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF9O43307 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ARHGEF9O43307 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.03■□□□□ 0.48
ARHGEF9O43307 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
ARHGEF9O43307 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF9O43307 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF9O43307 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.02■□□□□ 0.48
ARHGEF9O43307 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF9O43307 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF9O43307 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ARHGEF9O43307 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.02■□□□□ 0.48
ARHGEF9O43307 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.02■□□□□ 0.48
ARHGEF9O43307 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.02■□□□□ 0.48
ARHGEF9O43307 AC097658.1-201ENST00000475555 843 ntBASIC18.02■□□□□ 0.48
ARHGEF9O43307 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.02■□□□□ 0.48
ARHGEF9O43307 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.02■□□□□ 0.48
ARHGEF9O43307 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.02■□□□□ 0.48
ARHGEF9O43307 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
ARHGEF9O43307 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.02■□□□□ 0.48
ARHGEF9O43307 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.02■□□□□ 0.48
ARHGEF9O43307 AC068338.2-201ENST00000563278 1430 ntBASIC18.02■□□□□ 0.48
ARHGEF9O43307 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.02■□□□□ 0.48
ARHGEF9O43307 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.02■□□□□ 0.48
ARHGEF9O43307 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ARHGEF9O43307 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ARHGEF9O43307 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARHGEF9O43307 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
ARHGEF9O43307 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.02■□□□□ 0.47
ARHGEF9O43307 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.02■□□□□ 0.47
ARHGEF9O43307 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARHGEF9O43307 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.02■□□□□ 0.47
ARHGEF9O43307 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ARHGEF9O43307 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.02■□□□□ 0.47
ARHGEF9O43307 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ARHGEF9O43307 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.01■□□□□ 0.47
ARHGEF9O43307 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF9O43307 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF9O43307 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
ARHGEF9O43307 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF9O43307 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF9O43307 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF9O43307 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF9O43307 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF9O43307 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ARHGEF9O43307 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms