Protein–RNA interactions for Protein: H3BPC8

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 53 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BPC8 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC10.9□□□□□ -0.66
H3BPC8 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
H3BPC8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC10.9□□□□□ -0.66
H3BPC8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
H3BPC8 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC10.9□□□□□ -0.66
H3BPC8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC10.9□□□□□ -0.66
H3BPC8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC10.9□□□□□ -0.66
H3BPC8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
H3BPC8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC10.9□□□□□ -0.66
H3BPC8 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
H3BPC8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC10.9□□□□□ -0.66
H3BPC8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
H3BPC8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
H3BPC8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
H3BPC8 AC068587.6-202ENST00000641839 5619 ntBASIC10.9□□□□□ -0.66
H3BPC8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
H3BPC8 METRNL-202ENST00000570778 967 ntTSL 5 BASIC10.9□□□□□ -0.66
H3BPC8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
H3BPC8 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
H3BPC8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
H3BPC8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC10.9□□□□□ -0.66
H3BPC8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC10.9□□□□□ -0.66
H3BPC8 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
H3BPC8 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
H3BPC8 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H3BPC8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H3BPC8 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H3BPC8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
H3BPC8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
H3BPC8 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC10.9□□□□□ -0.67
H3BPC8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC10.89□□□□□ -0.67
H3BPC8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
H3BPC8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
H3BPC8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC10.89□□□□□ -0.67
H3BPC8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC10.89□□□□□ -0.67
H3BPC8 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
H3BPC8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC10.89□□□□□ -0.67
H3BPC8 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
H3BPC8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
H3BPC8 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC10.89□□□□□ -0.67
H3BPC8 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 MIR2861-201ENST00000636310 90 ntBASIC10.89□□□□□ -0.67
H3BPC8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
H3BPC8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC10.89□□□□□ -0.67
H3BPC8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC10.89□□□□□ -0.67
H3BPC8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 AL162741.1-201ENST00000565563 1558 ntBASIC10.89□□□□□ -0.67
H3BPC8 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC10.89□□□□□ -0.67
H3BPC8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC10.89□□□□□ -0.67
H3BPC8 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC10.89□□□□□ -0.67
H3BPC8 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
H3BPC8 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC10.89□□□□□ -0.67
H3BPC8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC10.89□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms