Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15.71■□□□□ 0.11
SRRM4A7MD48 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.71■□□□□ 0.11
SRRM4A7MD48 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC15.71■□□□□ 0.11
SRRM4A7MD48 AC133041.1-202ENST00000642053 222 ntBASIC15.71■□□□□ 0.11
SRRM4A7MD48 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.71■□□□□ 0.11
SRRM4A7MD48 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SRRM4A7MD48 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.71■□□□□ 0.1
SRRM4A7MD48 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.71■□□□□ 0.1
SRRM4A7MD48 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRRM4A7MD48 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRRM4A7MD48 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRRM4A7MD48 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRRM4A7MD48 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRRM4A7MD48 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SRRM4A7MD48 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRRM4A7MD48 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 AC069152.1-201ENST00000438030 544 ntBASIC15.7■□□□□ 0.1
SRRM4A7MD48 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 AC120498.8-201ENST00000614275 531 ntBASIC15.7■□□□□ 0.1
SRRM4A7MD48 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRRM4A7MD48 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRRM4A7MD48 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRRM4A7MD48 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRRM4A7MD48 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRRM4A7MD48 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRRM4A7MD48 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.7■□□□□ 0.1
SRRM4A7MD48 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SRRM4A7MD48 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM4A7MD48 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.69■□□□□ 0.1
SRRM4A7MD48 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM4A7MD48 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
SRRM4A7MD48 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM4A7MD48 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM4A7MD48 AIRN-201ENST00000601203 4374 ntBASIC15.69■□□□□ 0.1
SRRM4A7MD48 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC15.69■□□□□ 0.1
SRRM4A7MD48 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM4A7MD48 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SRRM4A7MD48 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.69■□□□□ 0.1
SRRM4A7MD48 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
SRRM4A7MD48 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC15.69■□□□□ 0.1
SRRM4A7MD48 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.69■□□□□ 0.1
SRRM4A7MD48 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC15.69■□□□□ 0.1
SRRM4A7MD48 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM4A7MD48 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC15.69■□□□□ 0.1
SRRM4A7MD48 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM4A7MD48 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM4A7MD48 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM4A7MD48 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM4A7MD48 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRRM4A7MD48 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SRRM4A7MD48 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
SRRM4A7MD48 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SRRM4A7MD48 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.68■□□□□ 0.1
SRRM4A7MD48 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC15.68■□□□□ 0.1
SRRM4A7MD48 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.68■□□□□ 0.1
SRRM4A7MD48 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.68■□□□□ 0.1
SRRM4A7MD48 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.68■□□□□ 0.1
SRRM4A7MD48 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.68■□□□□ 0.1
SRRM4A7MD48 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC15.68■□□□□ 0.1
SRRM4A7MD48 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC15.68■□□□□ 0.1
SRRM4A7MD48 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SRRM4A7MD48 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SRRM4A7MD48 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SRRM4A7MD48 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SRRM4A7MD48 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC15.68■□□□□ 0.1
SRRM4A7MD48 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRRM4A7MD48 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRRM4A7MD48 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms