Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGA7Q9Y5G6 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGA7Q9Y5G6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PCDHGA7Q9Y5G6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC25.4■■□□□ 1.66
PCDHGA7Q9Y5G6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PCDHGA7Q9Y5G6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
PCDHGA7Q9Y5G6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
PCDHGA7Q9Y5G6 CR559946.2-201ENST00000623684 991 ntBASIC25.39■■□□□ 1.66
PCDHGA7Q9Y5G6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
PCDHGA7Q9Y5G6 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGA7Q9Y5G6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PCDHGA7Q9Y5G6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
PCDHGA7Q9Y5G6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGA7Q9Y5G6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PCDHGA7Q9Y5G6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC25.37■■□□□ 1.65
PCDHGA7Q9Y5G6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PCDHGA7Q9Y5G6 HSD17B1P1-201ENST00000590052 955 ntBASIC25.36■■□□□ 1.65
PCDHGA7Q9Y5G6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.36■■□□□ 1.65
PCDHGA7Q9Y5G6 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.35■■□□□ 1.65
PCDHGA7Q9Y5G6 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGA7Q9Y5G6 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PCDHGA7Q9Y5G6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGA7Q9Y5G6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGA7Q9Y5G6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.34■■□□□ 1.65
PCDHGA7Q9Y5G6 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.34■■□□□ 1.65
PCDHGA7Q9Y5G6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.33■■□□□ 1.65
PCDHGA7Q9Y5G6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.33■■□□□ 1.65
PCDHGA7Q9Y5G6 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.33■■□□□ 1.65
PCDHGA7Q9Y5G6 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.32■■□□□ 1.64
PCDHGA7Q9Y5G6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGA7Q9Y5G6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
PCDHGA7Q9Y5G6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.31■■□□□ 1.64
PCDHGA7Q9Y5G6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGA7Q9Y5G6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGA7Q9Y5G6 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
PCDHGA7Q9Y5G6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.3■■□□□ 1.64
PCDHGA7Q9Y5G6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHGA7Q9Y5G6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
PCDHGA7Q9Y5G6 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGA7Q9Y5G6 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
PCDHGA7Q9Y5G6 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
PCDHGA7Q9Y5G6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHGA7Q9Y5G6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHGA7Q9Y5G6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
PCDHGA7Q9Y5G6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.27■■□□□ 1.64
PCDHGA7Q9Y5G6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGA7Q9Y5G6 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHGA7Q9Y5G6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.25■■□□□ 1.63
PCDHGA7Q9Y5G6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGA7Q9Y5G6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHGA7Q9Y5G6 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGA7Q9Y5G6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.24■■□□□ 1.63
PCDHGA7Q9Y5G6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.24■■□□□ 1.63
PCDHGA7Q9Y5G6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHGA7Q9Y5G6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
PCDHGA7Q9Y5G6 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGA7Q9Y5G6 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHGA7Q9Y5G6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
PCDHGA7Q9Y5G6 AL139393.2-201ENST00000608721 2025 ntBASIC25.2■■□□□ 1.63
PCDHGA7Q9Y5G6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHGA7Q9Y5G6 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.2■■□□□ 1.62
PCDHGA7Q9Y5G6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHGA7Q9Y5G6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.19■■□□□ 1.62
PCDHGA7Q9Y5G6 DUX4L13-201ENST00000554103 1267 ntBASIC25.19■■□□□ 1.62
PCDHGA7Q9Y5G6 DUX4L15-201ENST00000611059 1267 ntBASIC25.19■■□□□ 1.62
PCDHGA7Q9Y5G6 DUX4L23-201ENST00000615195 1269 ntBASIC25.19■■□□□ 1.62
PCDHGA7Q9Y5G6 DUX4L24-201ENST00000617576 1269 ntBASIC25.19■■□□□ 1.62
PCDHGA7Q9Y5G6 DUX4L22-201ENST00000618238 1269 ntBASIC25.19■■□□□ 1.62
PCDHGA7Q9Y5G6 DUX4L20-201ENST00000619712 1269 ntBASIC25.19■■□□□ 1.62
PCDHGA7Q9Y5G6 DUX4L21-201ENST00000622058 1269 ntBASIC25.19■■□□□ 1.62
PCDHGA7Q9Y5G6 DUX4L10-201ENST00000622460 1267 ntBASIC25.19■■□□□ 1.62
PCDHGA7Q9Y5G6 DUX4L25-201ENST00000624915 1269 ntBASIC25.19■■□□□ 1.62
PCDHGA7Q9Y5G6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
PCDHGA7Q9Y5G6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGA7Q9Y5G6 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHGA7Q9Y5G6 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.18■■□□□ 1.62
PCDHGA7Q9Y5G6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.17■■□□□ 1.62
PCDHGA7Q9Y5G6 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHGA7Q9Y5G6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
PCDHGA7Q9Y5G6 DRD5P2-201ENST00000421395 2012 ntBASIC25.17■■□□□ 1.62
PCDHGA7Q9Y5G6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
PCDHGA7Q9Y5G6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHGA7Q9Y5G6 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
PCDHGA7Q9Y5G6 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHGA7Q9Y5G6 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHGA7Q9Y5G6 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
PCDHGA7Q9Y5G6 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
PCDHGA7Q9Y5G6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.14■■□□□ 1.61
PCDHGA7Q9Y5G6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.13■■□□□ 1.61
PCDHGA7Q9Y5G6 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.13■■□□□ 1.61
PCDHGA7Q9Y5G6 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGA7Q9Y5G6 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
PCDHGA7Q9Y5G6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGA7Q9Y5G6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGA7Q9Y5G6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
PCDHGA7Q9Y5G6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
PCDHGA7Q9Y5G6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.11■■□□□ 1.61
PCDHGA7Q9Y5G6 METRNL-202ENST00000570778 967 ntTSL 5 BASIC25.11■■□□□ 1.61
PCDHGA7Q9Y5G6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
PCDHGA7Q9Y5G6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 13.3 ms