Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00588Q9Y4M8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00588Q9Y4M8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LINC00588Q9Y4M8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.68■□□□□ 0.42
LINC00588Q9Y4M8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC00588Q9Y4M8 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.67■□□□□ 0.42
LINC00588Q9Y4M8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.66■□□□□ 0.42
LINC00588Q9Y4M8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LINC00588Q9Y4M8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC17.66■□□□□ 0.42
LINC00588Q9Y4M8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00588Q9Y4M8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00588Q9Y4M8 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00588Q9Y4M8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.65■□□□□ 0.42
LINC00588Q9Y4M8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.65■□□□□ 0.42
LINC00588Q9Y4M8 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00588Q9Y4M8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC00588Q9Y4M8 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC17.64■□□□□ 0.42
LINC00588Q9Y4M8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
LINC00588Q9Y4M8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
LINC00588Q9Y4M8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00588Q9Y4M8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00588Q9Y4M8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.63■□□□□ 0.41
LINC00588Q9Y4M8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC00588Q9Y4M8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00588Q9Y4M8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC00588Q9Y4M8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC00588Q9Y4M8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LINC00588Q9Y4M8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
LINC00588Q9Y4M8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00588Q9Y4M8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00588Q9Y4M8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC00588Q9Y4M8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC00588Q9Y4M8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00588Q9Y4M8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00588Q9Y4M8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.61■□□□□ 0.41
LINC00588Q9Y4M8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00588Q9Y4M8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00588Q9Y4M8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.61■□□□□ 0.41
LINC00588Q9Y4M8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00588Q9Y4M8 AC110285.7-201ENST00000624417 1536 ntBASIC17.61■□□□□ 0.41
LINC00588Q9Y4M8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00588Q9Y4M8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LINC00588Q9Y4M8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC00588Q9Y4M8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.6■□□□□ 0.41
LINC00588Q9Y4M8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00588Q9Y4M8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC00588Q9Y4M8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
LINC00588Q9Y4M8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00588Q9Y4M8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.59■□□□□ 0.41
LINC00588Q9Y4M8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC00588Q9Y4M8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC00588Q9Y4M8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LINC00588Q9Y4M8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00588Q9Y4M8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00588Q9Y4M8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00588Q9Y4M8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC17.58■□□□□ 0.4
LINC00588Q9Y4M8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00588Q9Y4M8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00588Q9Y4M8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00588Q9Y4M8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00588Q9Y4M8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00588Q9Y4M8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LINC00588Q9Y4M8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC00588Q9Y4M8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.57■□□□□ 0.4
LINC00588Q9Y4M8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LINC00588Q9Y4M8 AC008813.1-201ENST00000536597 885 ntBASIC17.57■□□□□ 0.4
LINC00588Q9Y4M8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
LINC00588Q9Y4M8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
LINC00588Q9Y4M8 AP004833.2-201ENST00000532228 1454 ntBASIC17.56■□□□□ 0.4
LINC00588Q9Y4M8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00588Q9Y4M8 ABHD17AP3-201ENST00000503096 1137 ntBASIC17.56■□□□□ 0.4
LINC00588Q9Y4M8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00588Q9Y4M8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00588Q9Y4M8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC00588Q9Y4M8 ABCB10P1-201ENST00000614297 2181 ntBASIC17.56■□□□□ 0.4
LINC00588Q9Y4M8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.56■□□□□ 0.4
LINC00588Q9Y4M8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC17.55■□□□□ 0.4
LINC00588Q9Y4M8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LINC00588Q9Y4M8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00588Q9Y4M8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LINC00588Q9Y4M8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC00588Q9Y4M8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LINC00588Q9Y4M8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC00588Q9Y4M8 HSD17B1P1-201ENST00000590052 955 ntBASIC17.54■□□□□ 0.4
LINC00588Q9Y4M8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00588Q9Y4M8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00588Q9Y4M8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00588Q9Y4M8 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00588Q9Y4M8 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LINC00588Q9Y4M8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
LINC00588Q9Y4M8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LINC00588Q9Y4M8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC17.52■□□□□ 0.4
LINC00588Q9Y4M8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.52■□□□□ 0.4
LINC00588Q9Y4M8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LINC00588Q9Y4M8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC17.52■□□□□ 0.4
LINC00588Q9Y4M8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
LINC00588Q9Y4M8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
LINC00588Q9Y4M8 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LINC00588Q9Y4M8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.51■□□□□ 0.39
LINC00588Q9Y4M8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms