Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CD248Q9HCU0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CD248Q9HCU0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.65■■□□□ 1.86
CD248Q9HCU0 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
CD248Q9HCU0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CD248Q9HCU0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CD248Q9HCU0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CD248Q9HCU0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
CD248Q9HCU0 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CD248Q9HCU0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.64■■□□□ 1.86
CD248Q9HCU0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CD248Q9HCU0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CD248Q9HCU0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CD248Q9HCU0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.63■■□□□ 1.85
CD248Q9HCU0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.62■■□□□ 1.85
CD248Q9HCU0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC26.62■■□□□ 1.85
CD248Q9HCU0 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CD248Q9HCU0 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CD248Q9HCU0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CD248Q9HCU0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CD248Q9HCU0 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
CD248Q9HCU0 DUX4L13-201ENST00000554103 1267 ntBASIC26.6■■□□□ 1.85
CD248Q9HCU0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.6■■□□□ 1.85
CD248Q9HCU0 DUX4L15-201ENST00000611059 1267 ntBASIC26.6■■□□□ 1.85
CD248Q9HCU0 DUX4L23-201ENST00000615195 1269 ntBASIC26.6■■□□□ 1.85
CD248Q9HCU0 DUX4L24-201ENST00000617576 1269 ntBASIC26.6■■□□□ 1.85
CD248Q9HCU0 DUX4L22-201ENST00000618238 1269 ntBASIC26.6■■□□□ 1.85
CD248Q9HCU0 DUX4L20-201ENST00000619712 1269 ntBASIC26.6■■□□□ 1.85
CD248Q9HCU0 DUX4L21-201ENST00000622058 1269 ntBASIC26.6■■□□□ 1.85
CD248Q9HCU0 DUX4L10-201ENST00000622460 1267 ntBASIC26.6■■□□□ 1.85
CD248Q9HCU0 DUX4L25-201ENST00000624915 1269 ntBASIC26.6■■□□□ 1.85
CD248Q9HCU0 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CD248Q9HCU0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CD248Q9HCU0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
CD248Q9HCU0 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CD248Q9HCU0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CD248Q9HCU0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CD248Q9HCU0 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC26.57■■□□□ 1.84
CD248Q9HCU0 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.57■■□□□ 1.84
CD248Q9HCU0 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CD248Q9HCU0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CD248Q9HCU0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CD248Q9HCU0 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CD248Q9HCU0 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.55■■□□□ 1.84
CD248Q9HCU0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CD248Q9HCU0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.54■■□□□ 1.84
CD248Q9HCU0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
CD248Q9HCU0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.53■■□□□ 1.84
CD248Q9HCU0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
CD248Q9HCU0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
CD248Q9HCU0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.52■■□□□ 1.84
CD248Q9HCU0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CD248Q9HCU0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CD248Q9HCU0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CD248Q9HCU0 HSD17B1P1-201ENST00000590052 955 ntBASIC26.52■■□□□ 1.84
CD248Q9HCU0 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CD248Q9HCU0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CD248Q9HCU0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.51■■□□□ 1.83
CD248Q9HCU0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CD248Q9HCU0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CD248Q9HCU0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CD248Q9HCU0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
CD248Q9HCU0 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CD248Q9HCU0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.5■■□□□ 1.83
CD248Q9HCU0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.49■■□□□ 1.83
CD248Q9HCU0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
CD248Q9HCU0 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.49■■□□□ 1.83
CD248Q9HCU0 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CD248Q9HCU0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.48■■□□□ 1.83
CD248Q9HCU0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
CD248Q9HCU0 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.48■■□□□ 1.83
CD248Q9HCU0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CD248Q9HCU0 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.48■■□□□ 1.83
CD248Q9HCU0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CD248Q9HCU0 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC26.46■■□□□ 1.83
CD248Q9HCU0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
CD248Q9HCU0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
CD248Q9HCU0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
CD248Q9HCU0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.46■■□□□ 1.83
CD248Q9HCU0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
CD248Q9HCU0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.45■■□□□ 1.83
CD248Q9HCU0 AC010864.1-201ENST00000609407 1511 ntBASIC26.45■■□□□ 1.83
CD248Q9HCU0 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.44■■□□□ 1.82
CD248Q9HCU0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CD248Q9HCU0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
CD248Q9HCU0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.43■■□□□ 1.82
CD248Q9HCU0 LINC00273-201ENST00000539813 1452 ntBASIC26.42■■□□□ 1.82
CD248Q9HCU0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CD248Q9HCU0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
CD248Q9HCU0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.42■■□□□ 1.82
CD248Q9HCU0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CD248Q9HCU0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CD248Q9HCU0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CD248Q9HCU0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.42■■□□□ 1.82
CD248Q9HCU0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.42■■□□□ 1.82
CD248Q9HCU0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CD248Q9HCU0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.41■■□□□ 1.82
CD248Q9HCU0 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.41■■□□□ 1.82
CD248Q9HCU0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CD248Q9HCU0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms