Protein–RNA interactions for Protein: Q9HBM1

SPC25, Kinetochore protein Spc25, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25Q9HBM1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SPC25Q9HBM1 AC127502.1-201ENST00000399971 1502 ntBASIC29.02■■■□□ 2.24
SPC25Q9HBM1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
SPC25Q9HBM1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
SPC25Q9HBM1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29■■■□□ 2.23
SPC25Q9HBM1 NTF6A-201ENST00000591175 560 ntBASIC29■■■□□ 2.23
SPC25Q9HBM1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC29■■■□□ 2.23
SPC25Q9HBM1 AC135983.2-203ENST00000454486 1613 ntBASIC28.99■■■□□ 2.23
SPC25Q9HBM1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
SPC25Q9HBM1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
SPC25Q9HBM1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.98■■■□□ 2.23
SPC25Q9HBM1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
SPC25Q9HBM1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.97■■■□□ 2.23
SPC25Q9HBM1 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
SPC25Q9HBM1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC28.97■■■□□ 2.23
SPC25Q9HBM1 WHAMMP2-203ENST00000563942 1603 ntBASIC28.97■■■□□ 2.23
SPC25Q9HBM1 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.96■■■□□ 2.23
SPC25Q9HBM1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.96■■■□□ 2.23
SPC25Q9HBM1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.95■■■□□ 2.23
SPC25Q9HBM1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC28.95■■■□□ 2.22
SPC25Q9HBM1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.95■■■□□ 2.22
SPC25Q9HBM1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
SPC25Q9HBM1 AC012354.3-201ENST00000623734 483 ntBASIC28.94■■■□□ 2.22
SPC25Q9HBM1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
SPC25Q9HBM1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
SPC25Q9HBM1 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SPC25Q9HBM1 AC110285.7-201ENST00000624417 1536 ntBASIC28.9■■■□□ 2.22
SPC25Q9HBM1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC28.9■■■□□ 2.22
SPC25Q9HBM1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SPC25Q9HBM1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.9■■■□□ 2.22
SPC25Q9HBM1 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.22
SPC25Q9HBM1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.89■■■□□ 2.22
SPC25Q9HBM1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.89■■■□□ 2.22
SPC25Q9HBM1 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SPC25Q9HBM1 AC148477.6-201ENST00000623746 465 ntBASIC28.87■■■□□ 2.21
SPC25Q9HBM1 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
SPC25Q9HBM1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
SPC25Q9HBM1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.86■■■□□ 2.21
SPC25Q9HBM1 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SPC25Q9HBM1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SPC25Q9HBM1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
SPC25Q9HBM1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SPC25Q9HBM1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
SPC25Q9HBM1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
SPC25Q9HBM1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
SPC25Q9HBM1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SPC25Q9HBM1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.82■■■□□ 2.2
SPC25Q9HBM1 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
SPC25Q9HBM1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SPC25Q9HBM1 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC28.81■■■□□ 2.2
SPC25Q9HBM1 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.81■■■□□ 2.2
SPC25Q9HBM1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
SPC25Q9HBM1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
SPC25Q9HBM1 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
SPC25Q9HBM1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.8■■■□□ 2.2
SPC25Q9HBM1 AC060814.1-201ENST00000554326 538 ntBASIC28.8■■■□□ 2.2
SPC25Q9HBM1 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
SPC25Q9HBM1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SPC25Q9HBM1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SPC25Q9HBM1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC28.79■■■□□ 2.2
SPC25Q9HBM1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC28.78■■■□□ 2.2
SPC25Q9HBM1 AL135925.1-201ENST00000605920 1701 ntBASIC28.78■■■□□ 2.2
SPC25Q9HBM1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SPC25Q9HBM1 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.78■■■□□ 2.2
SPC25Q9HBM1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC28.78■■■□□ 2.2
SPC25Q9HBM1 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
SPC25Q9HBM1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
SPC25Q9HBM1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC28.76■■■□□ 2.19
SPC25Q9HBM1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SPC25Q9HBM1 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.76■■■□□ 2.19
SPC25Q9HBM1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC28.75■■■□□ 2.19
SPC25Q9HBM1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SPC25Q9HBM1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.75■■■□□ 2.19
SPC25Q9HBM1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SPC25Q9HBM1 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SPC25Q9HBM1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SPC25Q9HBM1 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
SPC25Q9HBM1 MIR219A2-201ENST00000608502 1504 ntBASIC28.74■■■□□ 2.19
SPC25Q9HBM1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
SPC25Q9HBM1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
SPC25Q9HBM1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SPC25Q9HBM1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.72■■■□□ 2.19
SPC25Q9HBM1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SPC25Q9HBM1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SPC25Q9HBM1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
SPC25Q9HBM1 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
SPC25Q9HBM1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC28.7■■■□□ 2.18
SPC25Q9HBM1 AL033527.3-201ENST00000566366 1196 ntBASIC28.7■■■□□ 2.18
SPC25Q9HBM1 U85056.1-201ENST00000616429 682 ntBASIC28.7■■■□□ 2.18
SPC25Q9HBM1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPC25Q9HBM1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPC25Q9HBM1 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPC25Q9HBM1 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SPC25Q9HBM1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPC25Q9HBM1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SPC25Q9HBM1 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPC25Q9HBM1 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
SPC25Q9HBM1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SPC25Q9HBM1 AC126177.7-201ENST00000547904 679 ntBASIC28.67■■■□□ 2.18
SPC25Q9HBM1 AC018358.1-201ENST00000631079 1402 ntBASIC28.67■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms