Protein–RNA interactions for Protein: Q9GZV3

SLC5A7, High affinity choline transporter 1, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A7Q9GZV3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC5A7Q9GZV3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC5A7Q9GZV3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC5A7Q9GZV3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SLC5A7Q9GZV3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SLC5A7Q9GZV3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC5A7Q9GZV3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SLC5A7Q9GZV3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC5A7Q9GZV3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC5A7Q9GZV3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC5A7Q9GZV3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC5A7Q9GZV3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC5A7Q9GZV3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC5A7Q9GZV3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC5A7Q9GZV3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC5A7Q9GZV3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC5A7Q9GZV3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
SLC5A7Q9GZV3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC5A7Q9GZV3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC5A7Q9GZV3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SLC5A7Q9GZV3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC5A7Q9GZV3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC5A7Q9GZV3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC5A7Q9GZV3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.36■■□□□ 1.01
SLC5A7Q9GZV3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.36■■□□□ 1.01
SLC5A7Q9GZV3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC5A7Q9GZV3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC5A7Q9GZV3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC5A7Q9GZV3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC5A7Q9GZV3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC5A7Q9GZV3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.35■■□□□ 1.01
SLC5A7Q9GZV3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.35■■□□□ 1.01
SLC5A7Q9GZV3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC5A7Q9GZV3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC5A7Q9GZV3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC5A7Q9GZV3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC5A7Q9GZV3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC5A7Q9GZV3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC5A7Q9GZV3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC5A7Q9GZV3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
SLC5A7Q9GZV3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC5A7Q9GZV3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC5A7Q9GZV3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC5A7Q9GZV3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
SLC5A7Q9GZV3 AP004833.2-201ENST00000532228 1454 ntBASIC21.32■■□□□ 1
SLC5A7Q9GZV3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC5A7Q9GZV3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC5A7Q9GZV3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC5A7Q9GZV3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.31■■□□□ 1
SLC5A7Q9GZV3 RARRES2P7-201ENST00000567349 469 ntBASIC21.31■■□□□ 1
SLC5A7Q9GZV3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC5A7Q9GZV3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC5A7Q9GZV3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SLC5A7Q9GZV3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SLC5A7Q9GZV3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SLC5A7Q9GZV3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC5A7Q9GZV3 BX255925.1-201ENST00000566954 1854 ntBASIC21.3■■□□□ 1
SLC5A7Q9GZV3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SLC5A7Q9GZV3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC5A7Q9GZV3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC5A7Q9GZV3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC5A7Q9GZV3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC5A7Q9GZV3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SLC5A7Q9GZV3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC5A7Q9GZV3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 SETD8P1-201ENST00000623146 1180 ntBASIC21.28■■□□□ 1
SLC5A7Q9GZV3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.27■■□□□ 1
SLC5A7Q9GZV3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
SLC5A7Q9GZV3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC5A7Q9GZV3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC5A7Q9GZV3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC5A7Q9GZV3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC5A7Q9GZV3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC5A7Q9GZV3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC5A7Q9GZV3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SLC5A7Q9GZV3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC5A7Q9GZV3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC5A7Q9GZV3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC5A7Q9GZV3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC5A7Q9GZV3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC5A7Q9GZV3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC5A7Q9GZV3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC5A7Q9GZV3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC5A7Q9GZV3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SLC5A7Q9GZV3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC5A7Q9GZV3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC5A7Q9GZV3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
SLC5A7Q9GZV3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SLC5A7Q9GZV3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC5A7Q9GZV3 AC127502.1-201ENST00000399971 1502 ntBASIC21.24■□□□□ 0.99
SLC5A7Q9GZV3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC5A7Q9GZV3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms