Protein–RNA interactions for Protein: Q9GZV3

SLC5A7, High affinity choline transporter 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A7Q9GZV3 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC5A7Q9GZV3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC5A7Q9GZV3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SLC5A7Q9GZV3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SLC5A7Q9GZV3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SLC5A7Q9GZV3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC5A7Q9GZV3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
SLC5A7Q9GZV3 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC5A7Q9GZV3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.39■■□□□ 1.01
SLC5A7Q9GZV3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC5A7Q9GZV3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC5A7Q9GZV3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.38■■□□□ 1.01
SLC5A7Q9GZV3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC5A7Q9GZV3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC5A7Q9GZV3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC5A7Q9GZV3 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC5A7Q9GZV3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
SLC5A7Q9GZV3 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC5A7Q9GZV3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC5A7Q9GZV3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
SLC5A7Q9GZV3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC5A7Q9GZV3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC5A7Q9GZV3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC5A7Q9GZV3 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC21.36■■□□□ 1.01
SLC5A7Q9GZV3 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC21.36■■□□□ 1.01
SLC5A7Q9GZV3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.36■■□□□ 1.01
SLC5A7Q9GZV3 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC5A7Q9GZV3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC5A7Q9GZV3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC5A7Q9GZV3 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC5A7Q9GZV3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.35■■□□□ 1.01
SLC5A7Q9GZV3 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.35■■□□□ 1.01
SLC5A7Q9GZV3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC5A7Q9GZV3 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.34■■□□□ 1.01
SLC5A7Q9GZV3 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC5A7Q9GZV3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC5A7Q9GZV3 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC5A7Q9GZV3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC5A7Q9GZV3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC5A7Q9GZV3 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
SLC5A7Q9GZV3 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC5A7Q9GZV3 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC5A7Q9GZV3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC5A7Q9GZV3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
SLC5A7Q9GZV3 AP004833.2-201ENST00000532228 1454 ntBASIC21.32■■□□□ 1
SLC5A7Q9GZV3 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
SLC5A7Q9GZV3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC5A7Q9GZV3 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.31■■□□□ 1
SLC5A7Q9GZV3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.31■■□□□ 1
SLC5A7Q9GZV3 RARRES2P7-201ENST00000567349 469 ntBASIC21.31■■□□□ 1
SLC5A7Q9GZV3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SLC5A7Q9GZV3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC5A7Q9GZV3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SLC5A7Q9GZV3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SLC5A7Q9GZV3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SLC5A7Q9GZV3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC5A7Q9GZV3 BX255925.1-201ENST00000566954 1854 ntBASIC21.3■■□□□ 1
SLC5A7Q9GZV3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
SLC5A7Q9GZV3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC5A7Q9GZV3 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC5A7Q9GZV3 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.29■■□□□ 1
SLC5A7Q9GZV3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC5A7Q9GZV3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
SLC5A7Q9GZV3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC5A7Q9GZV3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 SETD8P1-201ENST00000623146 1180 ntBASIC21.28■■□□□ 1
SLC5A7Q9GZV3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
SLC5A7Q9GZV3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.27■■□□□ 1
SLC5A7Q9GZV3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
SLC5A7Q9GZV3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC5A7Q9GZV3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC5A7Q9GZV3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC5A7Q9GZV3 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC5A7Q9GZV3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC5A7Q9GZV3 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC5A7Q9GZV3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SLC5A7Q9GZV3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC5A7Q9GZV3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC5A7Q9GZV3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC5A7Q9GZV3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC5A7Q9GZV3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC5A7Q9GZV3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC5A7Q9GZV3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC5A7Q9GZV3 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC5A7Q9GZV3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SLC5A7Q9GZV3 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC5A7Q9GZV3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC5A7Q9GZV3 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
SLC5A7Q9GZV3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
SLC5A7Q9GZV3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC5A7Q9GZV3 AC127502.1-201ENST00000399971 1502 ntBASIC21.24■□□□□ 0.99
SLC5A7Q9GZV3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC5A7Q9GZV3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms