Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
KRTAP4-3Q9BYR4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
KRTAP4-3Q9BYR4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
KRTAP4-3Q9BYR4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
KRTAP4-3Q9BYR4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
KRTAP4-3Q9BYR4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
KRTAP4-3Q9BYR4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
KRTAP4-3Q9BYR4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC8.79□□□□□ -1
KRTAP4-3Q9BYR4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC8.79□□□□□ -1
KRTAP4-3Q9BYR4 ABHD17AP3-201ENST00000503096 1137 ntBASIC8.79□□□□□ -1
KRTAP4-3Q9BYR4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
KRTAP4-3Q9BYR4 AC135983.2-203ENST00000454486 1613 ntBASIC8.79□□□□□ -1
KRTAP4-3Q9BYR4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
KRTAP4-3Q9BYR4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC8.79□□□□□ -1
KRTAP4-3Q9BYR4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC8.79□□□□□ -1
KRTAP4-3Q9BYR4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC8.79□□□□□ -1
KRTAP4-3Q9BYR4 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP4-3Q9BYR4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP4-3Q9BYR4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP4-3Q9BYR4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC8.78□□□□□ -1
KRTAP4-3Q9BYR4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC8.78□□□□□ -1
KRTAP4-3Q9BYR4 HSD17B1P1-201ENST00000590052 955 ntBASIC8.78□□□□□ -1
KRTAP4-3Q9BYR4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP4-3Q9BYR4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
KRTAP4-3Q9BYR4 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
KRTAP4-3Q9BYR4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC8.77□□□□□ -1.01
KRTAP4-3Q9BYR4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP4-3Q9BYR4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
KRTAP4-3Q9BYR4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC8.77□□□□□ -1.01
KRTAP4-3Q9BYR4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP4-3Q9BYR4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP4-3Q9BYR4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC8.76□□□□□ -1.01
KRTAP4-3Q9BYR4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
KRTAP4-3Q9BYR4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
KRTAP4-3Q9BYR4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC8.76□□□□□ -1.01
KRTAP4-3Q9BYR4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP4-3Q9BYR4 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC8.76□□□□□ -1.01
KRTAP4-3Q9BYR4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP4-3Q9BYR4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP4-3Q9BYR4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP4-3Q9BYR4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
KRTAP4-3Q9BYR4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
KRTAP4-3Q9BYR4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC8.75□□□□□ -1.01
KRTAP4-3Q9BYR4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
KRTAP4-3Q9BYR4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
KRTAP4-3Q9BYR4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
KRTAP4-3Q9BYR4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
KRTAP4-3Q9BYR4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
KRTAP4-3Q9BYR4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
KRTAP4-3Q9BYR4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
KRTAP4-3Q9BYR4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
KRTAP4-3Q9BYR4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC8.74□□□□□ -1.01
KRTAP4-3Q9BYR4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
KRTAP4-3Q9BYR4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC8.74□□□□□ -1.01
KRTAP4-3Q9BYR4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC8.74□□□□□ -1.01
KRTAP4-3Q9BYR4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
KRTAP4-3Q9BYR4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC8.74□□□□□ -1.01
KRTAP4-3Q9BYR4 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
KRTAP4-3Q9BYR4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC8.74□□□□□ -1.01
KRTAP4-3Q9BYR4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
KRTAP4-3Q9BYR4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
KRTAP4-3Q9BYR4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC8.74□□□□□ -1.01
KRTAP4-3Q9BYR4 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC8.74□□□□□ -1.01
KRTAP4-3Q9BYR4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 AC100797.4-201ENST00000631653 1827 ntBASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 AC110285.7-201ENST00000624417 1536 ntBASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
KRTAP4-3Q9BYR4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP4-3Q9BYR4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
KRTAP4-3Q9BYR4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP4-3Q9BYR4 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC8.72□□□□□ -1.01
KRTAP4-3Q9BYR4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP4-3Q9BYR4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
KRTAP4-3Q9BYR4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
KRTAP4-3Q9BYR4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC8.71□□□□□ -1.01
KRTAP4-3Q9BYR4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC8.71□□□□□ -1.01
KRTAP4-3Q9BYR4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-3Q9BYR4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-3Q9BYR4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC8.71□□□□□ -1.02
KRTAP4-3Q9BYR4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-3Q9BYR4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC8.71□□□□□ -1.02
KRTAP4-3Q9BYR4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-3Q9BYR4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-3Q9BYR4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC8.71□□□□□ -1.02
KRTAP4-3Q9BYR4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-3Q9BYR4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
KRTAP4-3Q9BYR4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms