Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
KRTAP4-1Q9BYQ7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
KRTAP4-1Q9BYQ7 AC135983.2-203ENST00000454486 1613 ntBASIC13.61□□□□□ -0.23
KRTAP4-1Q9BYQ7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
KRTAP4-1Q9BYQ7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
KRTAP4-1Q9BYQ7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC13.61□□□□□ -0.23
KRTAP4-1Q9BYQ7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC13.61□□□□□ -0.23
KRTAP4-1Q9BYQ7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
KRTAP4-1Q9BYQ7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
KRTAP4-1Q9BYQ7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRTAP4-1Q9BYQ7 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
KRTAP4-1Q9BYQ7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
KRTAP4-1Q9BYQ7 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
KRTAP4-1Q9BYQ7 AC012354.3-201ENST00000623734 483 ntBASIC13.6□□□□□ -0.23
KRTAP4-1Q9BYQ7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
KRTAP4-1Q9BYQ7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRTAP4-1Q9BYQ7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRTAP4-1Q9BYQ7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
KRTAP4-1Q9BYQ7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KRTAP4-1Q9BYQ7 AC008813.1-201ENST00000536597 885 ntBASIC13.59□□□□□ -0.23
KRTAP4-1Q9BYQ7 U85056.1-201ENST00000616429 682 ntBASIC13.59□□□□□ -0.23
KRTAP4-1Q9BYQ7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
KRTAP4-1Q9BYQ7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
KRTAP4-1Q9BYQ7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
KRTAP4-1Q9BYQ7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
KRTAP4-1Q9BYQ7 AL033527.3-201ENST00000566366 1196 ntBASIC13.58□□□□□ -0.24
KRTAP4-1Q9BYQ7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC13.58□□□□□ -0.24
KRTAP4-1Q9BYQ7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KRTAP4-1Q9BYQ7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KRTAP4-1Q9BYQ7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
KRTAP4-1Q9BYQ7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC13.57□□□□□ -0.24
KRTAP4-1Q9BYQ7 CHST11-203ENST00000547956 936 ntTSL 2 BASIC13.57□□□□□ -0.24
KRTAP4-1Q9BYQ7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRTAP4-1Q9BYQ7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
KRTAP4-1Q9BYQ7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
KRTAP4-1Q9BYQ7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC13.57□□□□□ -0.24
KRTAP4-1Q9BYQ7 AC018358.1-201ENST00000631079 1402 ntBASIC13.56□□□□□ -0.24
KRTAP4-1Q9BYQ7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
KRTAP4-1Q9BYQ7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
KRTAP4-1Q9BYQ7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
KRTAP4-1Q9BYQ7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC13.56□□□□□ -0.24
KRTAP4-1Q9BYQ7 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC13.55□□□□□ -0.24
KRTAP4-1Q9BYQ7 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KRTAP4-1Q9BYQ7 AC060814.1-201ENST00000554326 538 ntBASIC13.55□□□□□ -0.24
KRTAP4-1Q9BYQ7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC13.55□□□□□ -0.24
KRTAP4-1Q9BYQ7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
KRTAP4-1Q9BYQ7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC13.54□□□□□ -0.24
KRTAP4-1Q9BYQ7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC13.54□□□□□ -0.24
KRTAP4-1Q9BYQ7 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRTAP4-1Q9BYQ7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRTAP4-1Q9BYQ7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KRTAP4-1Q9BYQ7 AC110285.7-201ENST00000624417 1536 ntBASIC13.54□□□□□ -0.24
KRTAP4-1Q9BYQ7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
KRTAP4-1Q9BYQ7 GFER-205ENST00000569451 517 ntTSL 5 BASIC13.53□□□□□ -0.24
KRTAP4-1Q9BYQ7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
KRTAP4-1Q9BYQ7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
KRTAP4-1Q9BYQ7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC13.53□□□□□ -0.24
KRTAP4-1Q9BYQ7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
KRTAP4-1Q9BYQ7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
KRTAP4-1Q9BYQ7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KRTAP4-1Q9BYQ7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC13.52□□□□□ -0.25
KRTAP4-1Q9BYQ7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC13.52□□□□□ -0.25
KRTAP4-1Q9BYQ7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC13.52□□□□□ -0.25
KRTAP4-1Q9BYQ7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC13.52□□□□□ -0.25
KRTAP4-1Q9BYQ7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
KRTAP4-1Q9BYQ7 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
KRTAP4-1Q9BYQ7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
KRTAP4-1Q9BYQ7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
KRTAP4-1Q9BYQ7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
KRTAP4-1Q9BYQ7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KRTAP4-1Q9BYQ7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KRTAP4-1Q9BYQ7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
KRTAP4-1Q9BYQ7 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KRTAP4-1Q9BYQ7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
KRTAP4-1Q9BYQ7 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC13.5□□□□□ -0.25
KRTAP4-1Q9BYQ7 KRT18P60-201ENST00000312876 1297 ntBASIC13.5□□□□□ -0.25
KRTAP4-1Q9BYQ7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
KRTAP4-1Q9BYQ7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC13.5□□□□□ -0.25
KRTAP4-1Q9BYQ7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC13.5□□□□□ -0.25
KRTAP4-1Q9BYQ7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
KRTAP4-1Q9BYQ7 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
KRTAP4-1Q9BYQ7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
KRTAP4-1Q9BYQ7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC13.49□□□□□ -0.25
KRTAP4-1Q9BYQ7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC13.49□□□□□ -0.25
KRTAP4-1Q9BYQ7 AC148477.6-201ENST00000623746 465 ntBASIC13.49□□□□□ -0.25
KRTAP4-1Q9BYQ7 AL135925.1-201ENST00000605920 1701 ntBASIC13.49□□□□□ -0.25
KRTAP4-1Q9BYQ7 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KRTAP4-1Q9BYQ7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KRTAP4-1Q9BYQ7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
KRTAP4-1Q9BYQ7 AC004987.1-201ENST00000428627 508 ntBASIC13.48□□□□□ -0.25
KRTAP4-1Q9BYQ7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
KRTAP4-1Q9BYQ7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KRTAP4-1Q9BYQ7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KRTAP4-1Q9BYQ7 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
KRTAP4-1Q9BYQ7 MIR219A2-201ENST00000608502 1504 ntBASIC13.48□□□□□ -0.25
KRTAP4-1Q9BYQ7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KRTAP4-1Q9BYQ7 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KRTAP4-1Q9BYQ7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
KRTAP4-1Q9BYQ7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
KRTAP4-1Q9BYQ7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms