Protein–RNA interactions for Protein: Q99504

EYA3, Eyes absent homolog 3, humanhuman

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EYA3Q99504 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
EYA3Q99504 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
EYA3Q99504 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
EYA3Q99504 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
EYA3Q99504 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.67■■■□□ 2.66
EYA3Q99504 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC31.67■■■□□ 2.66
EYA3Q99504 WHAMMP2-203ENST00000563942 1603 ntBASIC31.67■■■□□ 2.66
EYA3Q99504 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.67■■■□□ 2.66
EYA3Q99504 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC31.66■■■□□ 2.66
EYA3Q99504 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.66■■■□□ 2.66
EYA3Q99504 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
EYA3Q99504 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
EYA3Q99504 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
EYA3Q99504 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
EYA3Q99504 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
EYA3Q99504 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
EYA3Q99504 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
EYA3Q99504 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC31.62■■■□□ 2.65
EYA3Q99504 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC31.61■■■□□ 2.65
EYA3Q99504 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.61■■■□□ 2.65
EYA3Q99504 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.6■■■□□ 2.65
EYA3Q99504 CHST11-203ENST00000547956 936 ntTSL 2 BASIC31.6■■■□□ 2.65
EYA3Q99504 NTF6A-201ENST00000591175 560 ntBASIC31.6■■■□□ 2.65
EYA3Q99504 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
EYA3Q99504 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
EYA3Q99504 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.58■■■□□ 2.65
EYA3Q99504 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
EYA3Q99504 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
EYA3Q99504 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
EYA3Q99504 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
EYA3Q99504 AC110285.7-201ENST00000624417 1536 ntBASIC31.55■■■□□ 2.64
EYA3Q99504 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
EYA3Q99504 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC31.55■■■□□ 2.64
EYA3Q99504 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.55■■■□□ 2.64
EYA3Q99504 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
EYA3Q99504 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
EYA3Q99504 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.53■■■□□ 2.64
EYA3Q99504 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC31.52■■■□□ 2.64
EYA3Q99504 AC148477.6-201ENST00000623746 465 ntBASIC31.52■■■□□ 2.64
EYA3Q99504 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
EYA3Q99504 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.51■■■□□ 2.64
EYA3Q99504 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC31.51■■■□□ 2.64
EYA3Q99504 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.64
EYA3Q99504 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.51■■■□□ 2.63
EYA3Q99504 AC012354.3-201ENST00000623734 483 ntBASIC31.51■■■□□ 2.63
EYA3Q99504 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
EYA3Q99504 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
EYA3Q99504 AL135925.1-201ENST00000605920 1701 ntBASIC31.49■■■□□ 2.63
EYA3Q99504 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
EYA3Q99504 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
EYA3Q99504 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
EYA3Q99504 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
EYA3Q99504 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC31.46■■■□□ 2.63
EYA3Q99504 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC31.46■■■□□ 2.63
EYA3Q99504 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC31.46■■■□□ 2.63
EYA3Q99504 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
EYA3Q99504 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.45■■■□□ 2.63
EYA3Q99504 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
EYA3Q99504 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
EYA3Q99504 AC060814.1-201ENST00000554326 538 ntBASIC31.45■■■□□ 2.63
EYA3Q99504 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
EYA3Q99504 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC31.45■■■□□ 2.62
EYA3Q99504 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
EYA3Q99504 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31.44■■■□□ 2.62
EYA3Q99504 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
EYA3Q99504 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
EYA3Q99504 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
EYA3Q99504 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
EYA3Q99504 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC31.41■■■□□ 2.62
EYA3Q99504 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
EYA3Q99504 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.4■■■□□ 2.62
EYA3Q99504 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
EYA3Q99504 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
EYA3Q99504 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
EYA3Q99504 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
EYA3Q99504 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
EYA3Q99504 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC31.38■■■□□ 2.61
EYA3Q99504 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.38■■■□□ 2.61
EYA3Q99504 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
EYA3Q99504 MIR219A2-201ENST00000608502 1504 ntBASIC31.37■■■□□ 2.61
EYA3Q99504 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
EYA3Q99504 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC31.36■■■□□ 2.61
EYA3Q99504 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
EYA3Q99504 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
EYA3Q99504 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC31.35■■■□□ 2.61
EYA3Q99504 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
EYA3Q99504 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
EYA3Q99504 HYI-213ENST00000583037 1322 ntTSL 5 BASIC31.34■■■□□ 2.61
EYA3Q99504 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
EYA3Q99504 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.34■■■□□ 2.61
EYA3Q99504 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
EYA3Q99504 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
EYA3Q99504 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
EYA3Q99504 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
EYA3Q99504 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
EYA3Q99504 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
EYA3Q99504 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
EYA3Q99504 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
EYA3Q99504 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC31.32■■■□□ 2.6
EYA3Q99504 U85056.1-201ENST00000616429 682 ntBASIC31.32■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms