Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.88■■□□□ 1.89
ZSWIM3Q96MP5 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ZSWIM3Q96MP5 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
ZSWIM3Q96MP5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ZSWIM3Q96MP5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.86■■□□□ 1.89
ZSWIM3Q96MP5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.86■■□□□ 1.89
ZSWIM3Q96MP5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.86■■□□□ 1.89
ZSWIM3Q96MP5 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ZSWIM3Q96MP5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ZSWIM3Q96MP5 RNF126P1-201ENST00000567452 1320 ntBASIC26.86■■□□□ 1.89
ZSWIM3Q96MP5 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.85■■□□□ 1.89
ZSWIM3Q96MP5 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.85■■□□□ 1.89
ZSWIM3Q96MP5 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.85■■□□□ 1.89
ZSWIM3Q96MP5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
ZSWIM3Q96MP5 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
ZSWIM3Q96MP5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.88
ZSWIM3Q96MP5 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ZSWIM3Q96MP5 ABHD17AP5-201ENST00000580133 923 ntBASIC26.82■■□□□ 1.88
ZSWIM3Q96MP5 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.82■■□□□ 1.88
ZSWIM3Q96MP5 AC008813.1-201ENST00000536597 885 ntBASIC26.81■■□□□ 1.88
ZSWIM3Q96MP5 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
ZSWIM3Q96MP5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
ZSWIM3Q96MP5 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
ZSWIM3Q96MP5 AC022413.1-201ENST00000624602 984 ntBASIC26.8■■□□□ 1.88
ZSWIM3Q96MP5 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZSWIM3Q96MP5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.79■■□□□ 1.88
ZSWIM3Q96MP5 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
ZSWIM3Q96MP5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
ZSWIM3Q96MP5 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZSWIM3Q96MP5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
ZSWIM3Q96MP5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.78■■□□□ 1.88
ZSWIM3Q96MP5 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
ZSWIM3Q96MP5 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ZSWIM3Q96MP5 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC26.78■■□□□ 1.88
ZSWIM3Q96MP5 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.77■■□□□ 1.88
ZSWIM3Q96MP5 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.77■■□□□ 1.88
ZSWIM3Q96MP5 AC110285.7-201ENST00000624417 1536 ntBASIC26.77■■□□□ 1.88
ZSWIM3Q96MP5 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZSWIM3Q96MP5 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ZSWIM3Q96MP5 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZSWIM3Q96MP5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ZSWIM3Q96MP5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.76■■□□□ 1.87
ZSWIM3Q96MP5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ZSWIM3Q96MP5 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ZSWIM3Q96MP5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.75■■□□□ 1.87
ZSWIM3Q96MP5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZSWIM3Q96MP5 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZSWIM3Q96MP5 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZSWIM3Q96MP5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZSWIM3Q96MP5 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC26.73■■□□□ 1.87
ZSWIM3Q96MP5 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.73■■□□□ 1.87
ZSWIM3Q96MP5 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZSWIM3Q96MP5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.72■■□□□ 1.87
ZSWIM3Q96MP5 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ZSWIM3Q96MP5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
ZSWIM3Q96MP5 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
ZSWIM3Q96MP5 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.71■■□□□ 1.87
ZSWIM3Q96MP5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
ZSWIM3Q96MP5 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.71■■□□□ 1.87
ZSWIM3Q96MP5 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ZSWIM3Q96MP5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
ZSWIM3Q96MP5 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
ZSWIM3Q96MP5 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
ZSWIM3Q96MP5 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
ZSWIM3Q96MP5 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.68■■□□□ 1.86
ZSWIM3Q96MP5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
ZSWIM3Q96MP5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.68■■□□□ 1.86
ZSWIM3Q96MP5 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
ZSWIM3Q96MP5 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
ZSWIM3Q96MP5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.67■■□□□ 1.86
ZSWIM3Q96MP5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
ZSWIM3Q96MP5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.66■■□□□ 1.86
ZSWIM3Q96MP5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
ZSWIM3Q96MP5 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
ZSWIM3Q96MP5 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.65■■□□□ 1.86
ZSWIM3Q96MP5 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
ZSWIM3Q96MP5 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
ZSWIM3Q96MP5 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
ZSWIM3Q96MP5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.63■■□□□ 1.85
ZSWIM3Q96MP5 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.63■■□□□ 1.85
ZSWIM3Q96MP5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
ZSWIM3Q96MP5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
ZSWIM3Q96MP5 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ZSWIM3Q96MP5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
ZSWIM3Q96MP5 AC148477.6-201ENST00000623746 465 ntBASIC26.62■■□□□ 1.85
ZSWIM3Q96MP5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.62■■□□□ 1.85
ZSWIM3Q96MP5 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.61■■□□□ 1.85
ZSWIM3Q96MP5 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.61■■□□□ 1.85
ZSWIM3Q96MP5 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
ZSWIM3Q96MP5 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.6■■□□□ 1.85
ZSWIM3Q96MP5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ZSWIM3Q96MP5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
ZSWIM3Q96MP5 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
ZSWIM3Q96MP5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ZSWIM3Q96MP5 AC060814.1-201ENST00000554326 538 ntBASIC26.59■■□□□ 1.85
ZSWIM3Q96MP5 NTF6A-201ENST00000591175 560 ntBASIC26.59■■□□□ 1.85
ZSWIM3Q96MP5 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
ZSWIM3Q96MP5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ZSWIM3Q96MP5 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ZSWIM3Q96MP5 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms