Protein–RNA interactions for Protein: Q96D70

R3HDM4, R3H domain-containing protein 4, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4Q96D70 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.01■□□□□ 0.95
R3HDM4Q96D70 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21■□□□□ 0.95
R3HDM4Q96D70 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21■□□□□ 0.95
R3HDM4Q96D70 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21■□□□□ 0.95
R3HDM4Q96D70 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
R3HDM4Q96D70 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
R3HDM4Q96D70 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
R3HDM4Q96D70 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.99■□□□□ 0.95
R3HDM4Q96D70 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.99■□□□□ 0.95
R3HDM4Q96D70 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.98■□□□□ 0.95
R3HDM4Q96D70 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HDM4Q96D70 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
R3HDM4Q96D70 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.98■□□□□ 0.95
R3HDM4Q96D70 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.98■□□□□ 0.95
R3HDM4Q96D70 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
R3HDM4Q96D70 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.98■□□□□ 0.95
R3HDM4Q96D70 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.97■□□□□ 0.95
R3HDM4Q96D70 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HDM4Q96D70 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HDM4Q96D70 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
R3HDM4Q96D70 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
R3HDM4Q96D70 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
R3HDM4Q96D70 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HDM4Q96D70 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HDM4Q96D70 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
R3HDM4Q96D70 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.96■□□□□ 0.95
R3HDM4Q96D70 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
R3HDM4Q96D70 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
R3HDM4Q96D70 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HDM4Q96D70 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.95■□□□□ 0.94
R3HDM4Q96D70 HLA-V-202ENST00000446817 847 ntBASIC20.95■□□□□ 0.94
R3HDM4Q96D70 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
R3HDM4Q96D70 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3HDM4Q96D70 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3HDM4Q96D70 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
R3HDM4Q96D70 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
R3HDM4Q96D70 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
R3HDM4Q96D70 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HDM4Q96D70 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.93■□□□□ 0.94
R3HDM4Q96D70 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HDM4Q96D70 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HDM4Q96D70 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HDM4Q96D70 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HDM4Q96D70 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
R3HDM4Q96D70 AP004833.2-201ENST00000532228 1454 ntBASIC20.93■□□□□ 0.94
R3HDM4Q96D70 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3HDM4Q96D70 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
R3HDM4Q96D70 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3HDM4Q96D70 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3HDM4Q96D70 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
R3HDM4Q96D70 ZNRF2P2-203ENST00000454624 420 ntBASIC20.91■□□□□ 0.94
R3HDM4Q96D70 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.91■□□□□ 0.94
R3HDM4Q96D70 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
R3HDM4Q96D70 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HDM4Q96D70 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.9■□□□□ 0.94
R3HDM4Q96D70 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.9■□□□□ 0.94
R3HDM4Q96D70 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HDM4Q96D70 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HDM4Q96D70 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
R3HDM4Q96D70 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3HDM4Q96D70 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3HDM4Q96D70 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.89■□□□□ 0.93
R3HDM4Q96D70 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
R3HDM4Q96D70 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3HDM4Q96D70 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
R3HDM4Q96D70 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
R3HDM4Q96D70 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
R3HDM4Q96D70 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.87■□□□□ 0.93
R3HDM4Q96D70 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
R3HDM4Q96D70 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
R3HDM4Q96D70 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
R3HDM4Q96D70 AC127502.1-201ENST00000399971 1502 ntBASIC20.87■□□□□ 0.93
R3HDM4Q96D70 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
R3HDM4Q96D70 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
R3HDM4Q96D70 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
R3HDM4Q96D70 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.87■□□□□ 0.93
R3HDM4Q96D70 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.86■□□□□ 0.93
R3HDM4Q96D70 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
R3HDM4Q96D70 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
R3HDM4Q96D70 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
R3HDM4Q96D70 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HDM4Q96D70 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HDM4Q96D70 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
R3HDM4Q96D70 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
R3HDM4Q96D70 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
R3HDM4Q96D70 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
R3HDM4Q96D70 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.84■□□□□ 0.93
R3HDM4Q96D70 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3HDM4Q96D70 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3HDM4Q96D70 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
R3HDM4Q96D70 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3HDM4Q96D70 DUX4L29-201ENST00000425409 679 ntBASIC20.84■□□□□ 0.93
R3HDM4Q96D70 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.84■□□□□ 0.93
R3HDM4Q96D70 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
R3HDM4Q96D70 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.84■□□□□ 0.93
R3HDM4Q96D70 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
R3HDM4Q96D70 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3HDM4Q96D70 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
R3HDM4Q96D70 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
R3HDM4Q96D70 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms