Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
BEST4Q8NFU0 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
BEST4Q8NFU0 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
BEST4Q8NFU0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
BEST4Q8NFU0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
BEST4Q8NFU0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
BEST4Q8NFU0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
BEST4Q8NFU0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.92■■□□□ 1.1
BEST4Q8NFU0 BX255925.1-201ENST00000566954 1854 ntBASIC21.92■■□□□ 1.1
BEST4Q8NFU0 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
BEST4Q8NFU0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
BEST4Q8NFU0 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.91■■□□□ 1.1
BEST4Q8NFU0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
BEST4Q8NFU0 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.91■■□□□ 1.1
BEST4Q8NFU0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
BEST4Q8NFU0 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
BEST4Q8NFU0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
BEST4Q8NFU0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BEST4Q8NFU0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BEST4Q8NFU0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
BEST4Q8NFU0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.9■■□□□ 1.1
BEST4Q8NFU0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BEST4Q8NFU0 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.9■■□□□ 1.1
BEST4Q8NFU0 AC010864.1-201ENST00000609407 1511 ntBASIC21.9■■□□□ 1.1
BEST4Q8NFU0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
BEST4Q8NFU0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
BEST4Q8NFU0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
BEST4Q8NFU0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
BEST4Q8NFU0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.89■■□□□ 1.09
BEST4Q8NFU0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.89■■□□□ 1.09
BEST4Q8NFU0 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
BEST4Q8NFU0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.89■■□□□ 1.09
BEST4Q8NFU0 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
BEST4Q8NFU0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
BEST4Q8NFU0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
BEST4Q8NFU0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.88■■□□□ 1.09
BEST4Q8NFU0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.88■■□□□ 1.09
BEST4Q8NFU0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.88■■□□□ 1.09
BEST4Q8NFU0 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
BEST4Q8NFU0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
BEST4Q8NFU0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.87■■□□□ 1.09
BEST4Q8NFU0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
BEST4Q8NFU0 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BEST4Q8NFU0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
BEST4Q8NFU0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
BEST4Q8NFU0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
BEST4Q8NFU0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
BEST4Q8NFU0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
BEST4Q8NFU0 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.84■■□□□ 1.09
BEST4Q8NFU0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
BEST4Q8NFU0 AL133380.1-201ENST00000506013 324 ntBASIC21.84■■□□□ 1.09
BEST4Q8NFU0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
BEST4Q8NFU0 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
BEST4Q8NFU0 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
BEST4Q8NFU0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
BEST4Q8NFU0 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
BEST4Q8NFU0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.82■■□□□ 1.08
BEST4Q8NFU0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.81■■□□□ 1.08
BEST4Q8NFU0 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
BEST4Q8NFU0 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
BEST4Q8NFU0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.81■■□□□ 1.08
BEST4Q8NFU0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.81■■□□□ 1.08
BEST4Q8NFU0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.81■■□□□ 1.08
BEST4Q8NFU0 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
BEST4Q8NFU0 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.81■■□□□ 1.08
BEST4Q8NFU0 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BEST4Q8NFU0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
BEST4Q8NFU0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BEST4Q8NFU0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.79■■□□□ 1.08
BEST4Q8NFU0 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BEST4Q8NFU0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
BEST4Q8NFU0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.78■■□□□ 1.08
BEST4Q8NFU0 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
BEST4Q8NFU0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
BEST4Q8NFU0 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.78■■□□□ 1.08
BEST4Q8NFU0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.77■■□□□ 1.08
BEST4Q8NFU0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
BEST4Q8NFU0 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BEST4Q8NFU0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.76■■□□□ 1.07
BEST4Q8NFU0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.76■■□□□ 1.07
BEST4Q8NFU0 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
BEST4Q8NFU0 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST4Q8NFU0 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.75■■□□□ 1.07
BEST4Q8NFU0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BEST4Q8NFU0 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
BEST4Q8NFU0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.75■■□□□ 1.07
BEST4Q8NFU0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
BEST4Q8NFU0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.74■■□□□ 1.07
BEST4Q8NFU0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
BEST4Q8NFU0 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
BEST4Q8NFU0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.73■■□□□ 1.07
BEST4Q8NFU0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
BEST4Q8NFU0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.73■■□□□ 1.07
BEST4Q8NFU0 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
BEST4Q8NFU0 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
BEST4Q8NFU0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.73■■□□□ 1.07
BEST4Q8NFU0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
BEST4Q8NFU0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
BEST4Q8NFU0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
BEST4Q8NFU0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms