Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SIMC1Q8NDZ2 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SIMC1Q8NDZ2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SIMC1Q8NDZ2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SIMC1Q8NDZ2 AC135983.2-203ENST00000454486 1613 ntBASIC24.03■■□□□ 1.44
SIMC1Q8NDZ2 WHAMMP2-203ENST00000563942 1603 ntBASIC24.03■■□□□ 1.44
SIMC1Q8NDZ2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SIMC1Q8NDZ2 AC100797.4-201ENST00000631653 1827 ntBASIC24.03■■□□□ 1.44
SIMC1Q8NDZ2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SIMC1Q8NDZ2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
SIMC1Q8NDZ2 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
SIMC1Q8NDZ2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
SIMC1Q8NDZ2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
SIMC1Q8NDZ2 DRD5P2-201ENST00000421395 2012 ntBASIC24.01■■□□□ 1.43
SIMC1Q8NDZ2 AP004833.2-201ENST00000532228 1454 ntBASIC24.01■■□□□ 1.43
SIMC1Q8NDZ2 LINC00273-201ENST00000539813 1452 ntBASIC24.01■■□□□ 1.43
SIMC1Q8NDZ2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC24.01■■□□□ 1.43
SIMC1Q8NDZ2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
SIMC1Q8NDZ2 DUX4L29-201ENST00000425409 679 ntBASIC24.01■■□□□ 1.43
SIMC1Q8NDZ2 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
SIMC1Q8NDZ2 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC24■■□□□ 1.43
SIMC1Q8NDZ2 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24■■□□□ 1.43
SIMC1Q8NDZ2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24■■□□□ 1.43
SIMC1Q8NDZ2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24■■□□□ 1.43
SIMC1Q8NDZ2 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC24■■□□□ 1.43
SIMC1Q8NDZ2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
SIMC1Q8NDZ2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC24■■□□□ 1.43
SIMC1Q8NDZ2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
SIMC1Q8NDZ2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.99■■□□□ 1.43
SIMC1Q8NDZ2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
SIMC1Q8NDZ2 HGH1-207ENST00000628266 258 ntTSL 5 BASIC23.99■■□□□ 1.43
SIMC1Q8NDZ2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
SIMC1Q8NDZ2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
SIMC1Q8NDZ2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SIMC1Q8NDZ2 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
SIMC1Q8NDZ2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
SIMC1Q8NDZ2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC23.98■■□□□ 1.43
SIMC1Q8NDZ2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.98■■□□□ 1.43
SIMC1Q8NDZ2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
SIMC1Q8NDZ2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
SIMC1Q8NDZ2 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
SIMC1Q8NDZ2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SIMC1Q8NDZ2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SIMC1Q8NDZ2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
SIMC1Q8NDZ2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
SIMC1Q8NDZ2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.97■■□□□ 1.43
SIMC1Q8NDZ2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.97■■□□□ 1.43
SIMC1Q8NDZ2 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
SIMC1Q8NDZ2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.96■■□□□ 1.43
SIMC1Q8NDZ2 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SIMC1Q8NDZ2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.96■■□□□ 1.43
SIMC1Q8NDZ2 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.96■■□□□ 1.43
SIMC1Q8NDZ2 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SIMC1Q8NDZ2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.96■■□□□ 1.43
SIMC1Q8NDZ2 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
SIMC1Q8NDZ2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
SIMC1Q8NDZ2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
SIMC1Q8NDZ2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC23.95■■□□□ 1.42
SIMC1Q8NDZ2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.95■■□□□ 1.42
SIMC1Q8NDZ2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
SIMC1Q8NDZ2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
SIMC1Q8NDZ2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.94■■□□□ 1.42
SIMC1Q8NDZ2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.94■■□□□ 1.42
SIMC1Q8NDZ2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC23.94■■□□□ 1.42
SIMC1Q8NDZ2 AC135731.1-201ENST00000569415 2548 ntBASIC23.94■■□□□ 1.42
SIMC1Q8NDZ2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
SIMC1Q8NDZ2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.94■■□□□ 1.42
SIMC1Q8NDZ2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
SIMC1Q8NDZ2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.93■■□□□ 1.42
SIMC1Q8NDZ2 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.93■■□□□ 1.42
SIMC1Q8NDZ2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
SIMC1Q8NDZ2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC23.93■■□□□ 1.42
SIMC1Q8NDZ2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.93■■□□□ 1.42
SIMC1Q8NDZ2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.93■■□□□ 1.42
SIMC1Q8NDZ2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
SIMC1Q8NDZ2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
SIMC1Q8NDZ2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SIMC1Q8NDZ2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.91■■□□□ 1.42
SIMC1Q8NDZ2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SIMC1Q8NDZ2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SIMC1Q8NDZ2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SIMC1Q8NDZ2 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.91■■□□□ 1.42
SIMC1Q8NDZ2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
SIMC1Q8NDZ2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
SIMC1Q8NDZ2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.91■■□□□ 1.42
SIMC1Q8NDZ2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
SIMC1Q8NDZ2 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.9■■□□□ 1.42
SIMC1Q8NDZ2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
SIMC1Q8NDZ2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SIMC1Q8NDZ2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SIMC1Q8NDZ2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
SIMC1Q8NDZ2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
SIMC1Q8NDZ2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
SIMC1Q8NDZ2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.88■■□□□ 1.41
SIMC1Q8NDZ2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
SIMC1Q8NDZ2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
SIMC1Q8NDZ2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
SIMC1Q8NDZ2 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC23.87■■□□□ 1.41
SIMC1Q8NDZ2 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.86■■□□□ 1.41
SIMC1Q8NDZ2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms