Protein–RNA interactions for Protein: Q8N587

ZNF561, Zinc finger protein 561, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561Q8N587 AP004833.2-201ENST00000532228 1454 ntBASIC21.61■■□□□ 1.05
ZNF561Q8N587 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.61■■□□□ 1.05
ZNF561Q8N587 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
ZNF561Q8N587 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF561Q8N587 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF561Q8N587 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.6■■□□□ 1.05
ZNF561Q8N587 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF561Q8N587 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.58■■□□□ 1.05
ZNF561Q8N587 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.57■■□□□ 1.04
ZNF561Q8N587 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.57■■□□□ 1.04
ZNF561Q8N587 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF561Q8N587 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ZNF561Q8N587 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC21.56■■□□□ 1.04
ZNF561Q8N587 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF561Q8N587 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.56■■□□□ 1.04
ZNF561Q8N587 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ZNF561Q8N587 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF561Q8N587 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF561Q8N587 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF561Q8N587 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF561Q8N587 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF561Q8N587 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF561Q8N587 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ZNF561Q8N587 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF561Q8N587 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF561Q8N587 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF561Q8N587 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF561Q8N587 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF561Q8N587 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF561Q8N587 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.52■■□□□ 1.04
ZNF561Q8N587 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF561Q8N587 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF561Q8N587 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF561Q8N587 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF561Q8N587 DUX4L29-201ENST00000425409 679 ntBASIC21.51■■□□□ 1.03
ZNF561Q8N587 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.51■■□□□ 1.03
ZNF561Q8N587 LINC00273-201ENST00000539813 1452 ntBASIC21.51■■□□□ 1.03
ZNF561Q8N587 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF561Q8N587 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF561Q8N587 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.5■■□□□ 1.03
ZNF561Q8N587 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF561Q8N587 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF561Q8N587 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ZNF561Q8N587 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF561Q8N587 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF561Q8N587 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
ZNF561Q8N587 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ZNF561Q8N587 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
ZNF561Q8N587 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF561Q8N587 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF561Q8N587 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
ZNF561Q8N587 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC21.47■■□□□ 1.03
ZNF561Q8N587 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.47■■□□□ 1.03
ZNF561Q8N587 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ZNF561Q8N587 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
ZNF561Q8N587 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
ZNF561Q8N587 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF561Q8N587 AC135983.2-203ENST00000454486 1613 ntBASIC21.46■■□□□ 1.03
ZNF561Q8N587 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.46■■□□□ 1.03
ZNF561Q8N587 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.46■■□□□ 1.03
ZNF561Q8N587 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
ZNF561Q8N587 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
ZNF561Q8N587 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF561Q8N587 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF561Q8N587 AC021231.2-201ENST00000594613 730 ntBASIC21.45■■□□□ 1.02
ZNF561Q8N587 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.45■■□□□ 1.02
ZNF561Q8N587 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.45■■□□□ 1.02
ZNF561Q8N587 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.45■■□□□ 1.02
ZNF561Q8N587 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.45■■□□□ 1.02
ZNF561Q8N587 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
ZNF561Q8N587 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF561Q8N587 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF561Q8N587 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF561Q8N587 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF561Q8N587 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF561Q8N587 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ZNF561Q8N587 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.44■■□□□ 1.02
ZNF561Q8N587 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
ZNF561Q8N587 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.43■■□□□ 1.02
ZNF561Q8N587 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
ZNF561Q8N587 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF561Q8N587 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ZNF561Q8N587 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.43■■□□□ 1.02
ZNF561Q8N587 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.43■■□□□ 1.02
ZNF561Q8N587 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.43■■□□□ 1.02
ZNF561Q8N587 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF561Q8N587 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
ZNF561Q8N587 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF561Q8N587 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ZNF561Q8N587 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.42■■□□□ 1.02
ZNF561Q8N587 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.42■■□□□ 1.02
ZNF561Q8N587 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC21.42■■□□□ 1.02
ZNF561Q8N587 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.42■■□□□ 1.02
ZNF561Q8N587 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ZNF561Q8N587 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.41■■□□□ 1.02
ZNF561Q8N587 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF561Q8N587 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF561Q8N587 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
ZNF561Q8N587 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.4■■□□□ 1.02
ZNF561Q8N587 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms