Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC008813.1-201ENST00000536597 885 ntBASIC25.8■■□□□ 1.72
TMEFF1Q8IYR6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
TMEFF1Q8IYR6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TMEFF1Q8IYR6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
TMEFF1Q8IYR6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
TMEFF1Q8IYR6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.79■■□□□ 1.72
TMEFF1Q8IYR6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
TMEFF1Q8IYR6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TMEFF1Q8IYR6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TMEFF1Q8IYR6 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
TMEFF1Q8IYR6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
TMEFF1Q8IYR6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
TMEFF1Q8IYR6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
TMEFF1Q8IYR6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.77■■□□□ 1.72
TMEFF1Q8IYR6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TMEFF1Q8IYR6 AC127502.1-201ENST00000399971 1502 ntBASIC25.77■■□□□ 1.72
TMEFF1Q8IYR6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TMEFF1Q8IYR6 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TMEFF1Q8IYR6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TMEFF1Q8IYR6 AC012354.3-201ENST00000623734 483 ntBASIC25.76■■□□□ 1.71
TMEFF1Q8IYR6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
TMEFF1Q8IYR6 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TMEFF1Q8IYR6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
TMEFF1Q8IYR6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
TMEFF1Q8IYR6 WHAMMP2-203ENST00000563942 1603 ntBASIC25.74■■□□□ 1.71
TMEFF1Q8IYR6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TMEFF1Q8IYR6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
TMEFF1Q8IYR6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
TMEFF1Q8IYR6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
TMEFF1Q8IYR6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
TMEFF1Q8IYR6 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
TMEFF1Q8IYR6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.73■■□□□ 1.71
TMEFF1Q8IYR6 AC135983.2-203ENST00000454486 1613 ntBASIC25.72■■□□□ 1.71
TMEFF1Q8IYR6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.72■■□□□ 1.71
TMEFF1Q8IYR6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.71■■□□□ 1.71
TMEFF1Q8IYR6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
TMEFF1Q8IYR6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
TMEFF1Q8IYR6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.7■■□□□ 1.7
TMEFF1Q8IYR6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TMEFF1Q8IYR6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.69■■□□□ 1.7
TMEFF1Q8IYR6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
TMEFF1Q8IYR6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TMEFF1Q8IYR6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
TMEFF1Q8IYR6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.68■■□□□ 1.7
TMEFF1Q8IYR6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
TMEFF1Q8IYR6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
TMEFF1Q8IYR6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
TMEFF1Q8IYR6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TMEFF1Q8IYR6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TMEFF1Q8IYR6 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
TMEFF1Q8IYR6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
TMEFF1Q8IYR6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.65■■□□□ 1.7
TMEFF1Q8IYR6 AC110285.7-201ENST00000624417 1536 ntBASIC25.65■■□□□ 1.7
TMEFF1Q8IYR6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TMEFF1Q8IYR6 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TMEFF1Q8IYR6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.64■■□□□ 1.7
TMEFF1Q8IYR6 AL033527.3-201ENST00000566366 1196 ntBASIC25.64■■□□□ 1.7
TMEFF1Q8IYR6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.69
TMEFF1Q8IYR6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TMEFF1Q8IYR6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
TMEFF1Q8IYR6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.62■■□□□ 1.69
TMEFF1Q8IYR6 AC060814.1-201ENST00000554326 538 ntBASIC25.61■■□□□ 1.69
TMEFF1Q8IYR6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
TMEFF1Q8IYR6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TMEFF1Q8IYR6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
TMEFF1Q8IYR6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TMEFF1Q8IYR6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TMEFF1Q8IYR6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TMEFF1Q8IYR6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
TMEFF1Q8IYR6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.6■■□□□ 1.69
TMEFF1Q8IYR6 U85056.1-201ENST00000616429 682 ntBASIC25.6■■□□□ 1.69
TMEFF1Q8IYR6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TMEFF1Q8IYR6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.6■■□□□ 1.69
TMEFF1Q8IYR6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
TMEFF1Q8IYR6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TMEFF1Q8IYR6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TMEFF1Q8IYR6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.58■■□□□ 1.69
TMEFF1Q8IYR6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.57■■□□□ 1.68
TMEFF1Q8IYR6 AC148477.6-201ENST00000623746 465 ntBASIC25.57■■□□□ 1.68
TMEFF1Q8IYR6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
TMEFF1Q8IYR6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
TMEFF1Q8IYR6 AC018358.1-201ENST00000631079 1402 ntBASIC25.56■■□□□ 1.68
TMEFF1Q8IYR6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TMEFF1Q8IYR6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
TMEFF1Q8IYR6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.56■■□□□ 1.68
TMEFF1Q8IYR6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
TMEFF1Q8IYR6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
TMEFF1Q8IYR6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TMEFF1Q8IYR6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
TMEFF1Q8IYR6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.55■■□□□ 1.68
TMEFF1Q8IYR6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TMEFF1Q8IYR6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
TMEFF1Q8IYR6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
TMEFF1Q8IYR6 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
TMEFF1Q8IYR6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
TMEFF1Q8IYR6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TMEFF1Q8IYR6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
TMEFF1Q8IYR6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TMEFF1Q8IYR6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.52■■□□□ 1.68
TMEFF1Q8IYR6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms