Protein–RNA interactions for Protein: Q86VI4

LAPTM4B, Lysosomal-associated transmembrane protein 4B, humanhuman

Predictions only

Length 370 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4BQ86VI4 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LAPTM4BQ86VI4 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC24.37■■□□□ 1.49
LAPTM4BQ86VI4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
LAPTM4BQ86VI4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LAPTM4BQ86VI4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
LAPTM4BQ86VI4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LAPTM4BQ86VI4 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
LAPTM4BQ86VI4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LAPTM4BQ86VI4 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LAPTM4BQ86VI4 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
LAPTM4BQ86VI4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LAPTM4BQ86VI4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
LAPTM4BQ86VI4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L13-201ENST00000554103 1267 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L15-201ENST00000611059 1267 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L23-201ENST00000615195 1269 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L24-201ENST00000617576 1269 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L22-201ENST00000618238 1269 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L20-201ENST00000619712 1269 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L21-201ENST00000622058 1269 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L10-201ENST00000622460 1267 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 DUX4L25-201ENST00000624915 1269 ntBASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.34■■□□□ 1.49
LAPTM4BQ86VI4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LAPTM4BQ86VI4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
LAPTM4BQ86VI4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
LAPTM4BQ86VI4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
LAPTM4BQ86VI4 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
LAPTM4BQ86VI4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.33■■□□□ 1.49
LAPTM4BQ86VI4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
LAPTM4BQ86VI4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 MIR639-201ENST00000384974 98 ntBASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 CHML-204ENST00000638121 920 ntTSL 2 BASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
LAPTM4BQ86VI4 AC139426.1-201ENST00000568218 2529 ntBASIC24.31■■□□□ 1.48
LAPTM4BQ86VI4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
LAPTM4BQ86VI4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
LAPTM4BQ86VI4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LAPTM4BQ86VI4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
LAPTM4BQ86VI4 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LAPTM4BQ86VI4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LAPTM4BQ86VI4 AC135983.2-203ENST00000454486 1613 ntBASIC24.28■■□□□ 1.48
LAPTM4BQ86VI4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
LAPTM4BQ86VI4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.28■■□□□ 1.48
LAPTM4BQ86VI4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC24.28■■□□□ 1.48
LAPTM4BQ86VI4 WHAMMP2-203ENST00000563942 1603 ntBASIC24.28■■□□□ 1.48
LAPTM4BQ86VI4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
LAPTM4BQ86VI4 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LAPTM4BQ86VI4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
LAPTM4BQ86VI4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
LAPTM4BQ86VI4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LAPTM4BQ86VI4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC24.26■■□□□ 1.47
LAPTM4BQ86VI4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
LAPTM4BQ86VI4 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.25■■□□□ 1.47
LAPTM4BQ86VI4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
LAPTM4BQ86VI4 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LAPTM4BQ86VI4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
LAPTM4BQ86VI4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
LAPTM4BQ86VI4 MIR4449-201ENST00000578365 66 ntBASIC24.24■■□□□ 1.47
LAPTM4BQ86VI4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LAPTM4BQ86VI4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
LAPTM4BQ86VI4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LAPTM4BQ86VI4 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
LAPTM4BQ86VI4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LAPTM4BQ86VI4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
LAPTM4BQ86VI4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
LAPTM4BQ86VI4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
LAPTM4BQ86VI4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
LAPTM4BQ86VI4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC24.19■■□□□ 1.46
LAPTM4BQ86VI4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
LAPTM4BQ86VI4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.18■■□□□ 1.46
LAPTM4BQ86VI4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
LAPTM4BQ86VI4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC24.18■■□□□ 1.46
LAPTM4BQ86VI4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
LAPTM4BQ86VI4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LAPTM4BQ86VI4 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.17■■□□□ 1.46
LAPTM4BQ86VI4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
LAPTM4BQ86VI4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LAPTM4BQ86VI4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
LAPTM4BQ86VI4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LAPTM4BQ86VI4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LAPTM4BQ86VI4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
LAPTM4BQ86VI4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LAPTM4BQ86VI4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.15■■□□□ 1.46
LAPTM4BQ86VI4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
LAPTM4BQ86VI4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.14■■□□□ 1.45
LAPTM4BQ86VI4 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
LAPTM4BQ86VI4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
LAPTM4BQ86VI4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
LAPTM4BQ86VI4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
LAPTM4BQ86VI4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
LAPTM4BQ86VI4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
LAPTM4BQ86VI4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms