Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL54Q6P161 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL54Q6P161 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.32■□□□□ 0.68
MRPL54Q6P161 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL54Q6P161 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL54Q6P161 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MRPL54Q6P161 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
MRPL54Q6P161 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC19.3■□□□□ 0.68
MRPL54Q6P161 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRPL54Q6P161 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
MRPL54Q6P161 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MRPL54Q6P161 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
MRPL54Q6P161 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
MRPL54Q6P161 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
MRPL54Q6P161 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
MRPL54Q6P161 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.28■□□□□ 0.68
MRPL54Q6P161 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
MRPL54Q6P161 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.27■□□□□ 0.68
MRPL54Q6P161 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.27■□□□□ 0.67
MRPL54Q6P161 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
MRPL54Q6P161 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.27■□□□□ 0.67
MRPL54Q6P161 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
MRPL54Q6P161 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MRPL54Q6P161 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC19.26■□□□□ 0.67
MRPL54Q6P161 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MRPL54Q6P161 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC19.25■□□□□ 0.67
MRPL54Q6P161 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRPL54Q6P161 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
MRPL54Q6P161 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MRPL54Q6P161 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MRPL54Q6P161 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
MRPL54Q6P161 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MRPL54Q6P161 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.24■□□□□ 0.67
MRPL54Q6P161 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MRPL54Q6P161 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MRPL54Q6P161 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPL54Q6P161 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
MRPL54Q6P161 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MRPL54Q6P161 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MRPL54Q6P161 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
MRPL54Q6P161 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.21■□□□□ 0.67
MRPL54Q6P161 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MRPL54Q6P161 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MRPL54Q6P161 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
MRPL54Q6P161 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.2■□□□□ 0.66
MRPL54Q6P161 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL54Q6P161 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
MRPL54Q6P161 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL54Q6P161 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL54Q6P161 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL54Q6P161 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MRPL54Q6P161 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MRPL54Q6P161 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MRPL54Q6P161 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC19.18■□□□□ 0.66
MRPL54Q6P161 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
MRPL54Q6P161 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MRPL54Q6P161 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.18■□□□□ 0.66
MRPL54Q6P161 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
MRPL54Q6P161 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL54Q6P161 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL54Q6P161 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL54Q6P161 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL54Q6P161 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MRPL54Q6P161 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MRPL54Q6P161 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MRPL54Q6P161 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC19.16■□□□□ 0.66
MRPL54Q6P161 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.16■□□□□ 0.66
MRPL54Q6P161 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MRPL54Q6P161 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
MRPL54Q6P161 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MRPL54Q6P161 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MRPL54Q6P161 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
MRPL54Q6P161 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MRPL54Q6P161 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC19.15■□□□□ 0.66
MRPL54Q6P161 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC19.15■□□□□ 0.66
MRPL54Q6P161 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC19.15■□□□□ 0.66
MRPL54Q6P161 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC19.15■□□□□ 0.66
MRPL54Q6P161 SNAI3-AS1-204ENST00000567997 2048 ntBASIC19.15■□□□□ 0.66
MRPL54Q6P161 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MRPL54Q6P161 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MRPL54Q6P161 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
MRPL54Q6P161 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MRPL54Q6P161 AC020928.2-201ENST00000588717 2197 ntBASIC19.14■□□□□ 0.65
MRPL54Q6P161 LINC01003-201ENST00000564834 1764 ntBASIC19.14■□□□□ 0.65
MRPL54Q6P161 AC091060.1-201ENST00000623524 1766 ntBASIC19.14■□□□□ 0.65
MRPL54Q6P161 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.13■□□□□ 0.65
MRPL54Q6P161 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.13■□□□□ 0.65
MRPL54Q6P161 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MRPL54Q6P161 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.13■□□□□ 0.65
MRPL54Q6P161 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
MRPL54Q6P161 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
MRPL54Q6P161 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.12■□□□□ 0.65
MRPL54Q6P161 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC19.12■□□□□ 0.65
MRPL54Q6P161 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.12■□□□□ 0.65
MRPL54Q6P161 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.11■□□□□ 0.65
MRPL54Q6P161 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
MRPL54Q6P161 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
MRPL54Q6P161 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
MRPL54Q6P161 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
MRPL54Q6P161 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms