Protein–RNA interactions for Protein: Q06224

YSH1, Endoribonuclease YSH1, yeastyeast

Predicted RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YSH1Q06224 SWM1YDR260C 513 nt8.57□□□□□ -1.04
YSH1Q06224 tE(CUC)DtE(CUC)D 72 nt8.57□□□□□ -1.04
YSH1Q06224 tE(CUC)ItE(CUC)I 72 nt8.57□□□□□ -1.04
YSH1Q06224 YKR012CYKR012C 378 nt8.56□□□□□ -1.04
YSH1Q06224 YRF1-1YDR545W 5391 nt8.55□□□□□ -1.04
YSH1Q06224 YRF1-5YLR467W 5391 nt8.55□□□□□ -1.04
YSH1Q06224 YRF1-8YOR396W 5391 nt8.55□□□□□ -1.04
YSH1Q06224 SER2YGR208W 930 nt8.55□□□□□ -1.04
YSH1Q06224 PFS2YNL317W 1398 nt8.55□□□□□ -1.04
YSH1Q06224 KGD2YDR148C 1392 nt8.54□□□□□ -1.04
YSH1Q06224 CHA1YCL064C 1083 nt8.54□□□□□ -1.04
YSH1Q06224 ATP10YLR393W 840 nt8.54□□□□□ -1.04
YSH1Q06224 YMR007WYMR007W 381 nt8.54□□□□□ -1.04
YSH1Q06224 YDR467CYDR467C 327 nt8.53□□□□□ -1.04
YSH1Q06224 YKL053WYKL053W 375 nt8.53□□□□□ -1.04
YSH1Q06224 ADH6YMR318C 1083 nt8.53□□□□□ -1.04
YSH1Q06224 RCR1YBR005W 642 nt8.53□□□□□ -1.04
YSH1Q06224 HEL1YKR017C 1656 nt8.53□□□□□ -1.04
YSH1Q06224 PUS7YOR243C 2031 nt8.53□□□□□ -1.04
YSH1Q06224 NPP2YEL016C 1482 nt8.52□□□□□ -1.05
YSH1Q06224 YER152W-AYER152W-A 567 nt8.52□□□□□ -1.05
YSH1Q06224 ATO2YNR002C 849 nt8.52□□□□□ -1.05
YSH1Q06224 NAM8YHR086W 1572 nt8.52□□□□□ -1.05
YSH1Q06224 HTS1YPR033C 1641 nt8.51□□□□□ -1.05
YSH1Q06224 SAN1YDR143C 1833 nt8.51□□□□□ -1.05
YSH1Q06224 CKI1YLR133W 1749 nt8.51□□□□□ -1.05
YSH1Q06224 YCR061WYCR061W 1896 nt8.51□□□□□ -1.05
YSH1Q06224 MAS2YHR024C 1449 nt8.5□□□□□ -1.05
YSH1Q06224 GPM1YKL152C 744 nt8.5□□□□□ -1.05
YSH1Q06224 CSM2YIL132C 642 nt8.49□□□□□ -1.05
YSH1Q06224 FET5YFL041W 1869 nt8.49□□□□□ -1.05
YSH1Q06224 SDS24YBR214W 1584 nt8.48□□□□□ -1.05
YSH1Q06224 SMC5YOL034W 3282 nt8.48□□□□□ -1.05
YSH1Q06224 THI3YDL080C 1830 nt8.48□□□□□ -1.05
YSH1Q06224 YMR316C-BYMR316C-B 309 nt8.48□□□□□ -1.05
YSH1Q06224 ENO1YGR254W 1314 nt8.48□□□□□ -1.05
YSH1Q06224 CDC13YDL220C 2775 nt8.48□□□□□ -1.05
YSH1Q06224 ORT1YOR130C 879 nt8.47□□□□□ -1.05
YSH1Q06224 snR4snR4 186 nt8.47□□□□□ -1.05
YSH1Q06224 HSV2YGR223C 1347 nt8.47□□□□□ -1.05
YSH1Q06224 YRF1-3YGR296W 5580 nt8.47□□□□□ -1.05
YSH1Q06224 YRF1-6YNL339C 5580 nt8.47□□□□□ -1.05
YSH1Q06224 YRF1-7YPL283C 5580 nt8.47□□□□□ -1.05
YSH1Q06224 SRP102YKL154W 735 nt8.46□□□□□ -1.06
YSH1Q06224 GGA2YHR108W 1758 nt8.45□□□□□ -1.06
YSH1Q06224 PRC1YMR297W 1599 nt8.45□□□□□ -1.06
YSH1Q06224 SBP1YHL034C 885 nt8.45□□□□□ -1.06
YSH1Q06224 YBL095WYBL095W 813 nt8.45□□□□□ -1.06
YSH1Q06224 REX2YLR059C 810 nt8.44□□□□□ -1.06
YSH1Q06224 YLR280CYLR280C 351 nt8.44□□□□□ -1.06
YSH1Q06224 YGR210CYGR210C 1236 nt8.43□□□□□ -1.06
YSH1Q06224 BUD20YLR074C 501 nt8.43□□□□□ -1.06
YSH1Q06224 YER152CYER152C 1332 nt8.43□□□□□ -1.06
YSH1Q06224 VBA3YCL069W 1377 nt8.43□□□□□ -1.06
YSH1Q06224 ERO1YML130C 1692 nt8.43□□□□□ -1.06
YSH1Q06224 TGA1tA(UGC)A 73 nt8.42□□□□□ -1.06
YSH1Q06224 tA(UGC)EtA(UGC)E 73 nt8.42□□□□□ -1.06
YSH1Q06224 tA(UGC)GtA(UGC)G 73 nt8.42□□□□□ -1.06
YSH1Q06224 tA(UGC)LtA(UGC)L 73 nt8.42□□□□□ -1.06
YSH1Q06224 tA(UGC)OtA(UGC)O 73 nt8.42□□□□□ -1.06
YSH1Q06224 SRP54YPR088C 1626 nt8.42□□□□□ -1.06
YSH1Q06224 FCY1YPR062W 477 nt8.41□□□□□ -1.06
YSH1Q06224 FCP1YMR277W 2199 nt8.41□□□□□ -1.06
YSH1Q06224 SLM3YDL033C 1254 nt8.4□□□□□ -1.06
YSH1Q06224 ERR3YMR323W 1314 nt8.38□□□□□ -1.07
YSH1Q06224 ERR1YOR393W 1314 nt8.38□□□□□ -1.07
YSH1Q06224 ERR2YPL281C 1314 nt8.38□□□□□ -1.07
YSH1Q06224 YMR253CYMR253C 1245 nt8.38□□□□□ -1.07
YSH1Q06224 CRN1YLR429W 1956 nt8.37□□□□□ -1.07
YSH1Q06224 TRP2YER090W 1524 nt8.37□□□□□ -1.07
YSH1Q06224 HXT11YOL156W 1704 nt8.37□□□□□ -1.07
YSH1Q06224 GAS1YMR307W 1680 nt8.37□□□□□ -1.07
YSH1Q06224 AAT1YKL106W 1356 nt8.36□□□□□ -1.07
YSH1Q06224 AAC3YBR085W 924 nt8.36□□□□□ -1.07
YSH1Q06224 YMC2YBR104W 990 nt8.36□□□□□ -1.07
YSH1Q06224 YPT11YNL304W 1254 nt8.35□□□□□ -1.07
YSH1Q06224 YPL108WYPL108W 507 nt8.34□□□□□ -1.07
YSH1Q06224 YLR072WYLR072W 2082 nt8.34□□□□□ -1.07
YSH1Q06224 PTC6YCR079W 1329 nt8.33□□□□□ -1.08
YSH1Q06224 SPE4YLR146C 903 nt8.33□□□□□ -1.08
YSH1Q06224 YOR343CYOR343C 327 nt8.33□□□□□ -1.08
YSH1Q06224 AQR1YNL065W 1761 nt8.33□□□□□ -1.08
YSH1Q06224 YFR020WYFR020W 699 nt8.32□□□□□ -1.08
YSH1Q06224 PAU21YOR394W 495 nt8.32□□□□□ -1.08
YSH1Q06224 PAU22YPL282C 495 nt8.32□□□□□ -1.08
YSH1Q06224 YIL177CYIL177C 5277 nt8.32□□□□□ -1.08
YSH1Q06224 YJR154WYJR154W 1041 nt8.31□□□□□ -1.08
YSH1Q06224 MRS4YKR052C 915 nt8.31□□□□□ -1.08
YSH1Q06224 GRH1YDR517W 1119 nt8.3□□□□□ -1.08
YSH1Q06224 HRA1HRA1 564 nt8.3□□□□□ -1.08
YSH1Q06224 EMC3YKL207W 762 nt8.3□□□□□ -1.08
YSH1Q06224 TOS2YGR221C 1869 nt8.3□□□□□ -1.08
YSH1Q06224 TMS1YDR105C 1422 nt8.29□□□□□ -1.08
YSH1Q06224 YJL160CYJL160C 864 nt8.28□□□□□ -1.08
YSH1Q06224 RSM7YJR113C 744 nt8.28□□□□□ -1.08
YSH1Q06224 MDH2YOL126C 1134 nt8.28□□□□□ -1.08
YSH1Q06224 SRM1YGL097W 1449 nt8.28□□□□□ -1.08
YSH1Q06224 RPL12BYDR418W 498 nt8.27□□□□□ -1.09
YSH1Q06224 HSM3YBR272C 1443 nt8.27□□□□□ -1.09
YSH1Q06224 YBL111CYBL111C 2004 nt8.26□□□□□ -1.09
Retrieved 100 of 7,029 protein–RNA pairs in 12.3 ms