Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 AL033527.3-201ENST00000566366 1196 ntBASIC35.08■■■■□ 3.21
ZC3H6P61129 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
ZC3H6P61129 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC35.06■■■■□ 3.2
ZC3H6P61129 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
ZC3H6P61129 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC35.05■■■■□ 3.2
ZC3H6P61129 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC35.05■■■■□ 3.2
ZC3H6P61129 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC35.04■■■■□ 3.2
ZC3H6P61129 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC35.03■■■■□ 3.2
ZC3H6P61129 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC35.03■■■■□ 3.2
ZC3H6P61129 WHAMMP2-203ENST00000563942 1603 ntBASIC35.03■■■■□ 3.2
ZC3H6P61129 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC35.02■■■■□ 3.2
ZC3H6P61129 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
ZC3H6P61129 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
ZC3H6P61129 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
ZC3H6P61129 U85056.1-201ENST00000616429 682 ntBASIC35.01■■■■□ 3.2
ZC3H6P61129 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC35.01■■■■□ 3.2
ZC3H6P61129 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC35■■■■□ 3.19
ZC3H6P61129 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC35■■■■□ 3.19
ZC3H6P61129 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC35■■■■□ 3.19
ZC3H6P61129 CHST11-203ENST00000547956 936 ntTSL 2 BASIC35■■■■□ 3.19
ZC3H6P61129 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC35■■■■□ 3.19
ZC3H6P61129 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC34.99■■■■□ 3.19
ZC3H6P61129 AC127502.1-201ENST00000399971 1502 ntBASIC34.99■■■■□ 3.19
ZC3H6P61129 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC34.98■■■■□ 3.19
ZC3H6P61129 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC34.98■■■■□ 3.19
ZC3H6P61129 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC34.98■■■■□ 3.19
ZC3H6P61129 AC135983.2-203ENST00000454486 1613 ntBASIC34.98■■■■□ 3.19
ZC3H6P61129 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC34.98■■■■□ 3.19
ZC3H6P61129 AC018358.1-201ENST00000631079 1402 ntBASIC34.98■■■■□ 3.19
ZC3H6P61129 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC34.97■■■■□ 3.19
ZC3H6P61129 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC34.97■■■■□ 3.19
ZC3H6P61129 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC34.96■■■■□ 3.19
ZC3H6P61129 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC34.95■■■■□ 3.19
ZC3H6P61129 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
ZC3H6P61129 HYI-213ENST00000583037 1322 ntTSL 5 BASIC34.94■■■■□ 3.18
ZC3H6P61129 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
ZC3H6P61129 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC34.93■■■■□ 3.18
ZC3H6P61129 AC060814.1-201ENST00000554326 538 ntBASIC34.93■■■■□ 3.18
ZC3H6P61129 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC34.93■■■■□ 3.18
ZC3H6P61129 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
ZC3H6P61129 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC34.92■■■■□ 3.18
ZC3H6P61129 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
ZC3H6P61129 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
ZC3H6P61129 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
ZC3H6P61129 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
ZC3H6P61129 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
ZC3H6P61129 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC34.89■■■■□ 3.18
ZC3H6P61129 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC34.88■■■■□ 3.17
ZC3H6P61129 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC34.88■■■■□ 3.17
ZC3H6P61129 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC34.87■■■■□ 3.17
ZC3H6P61129 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC34.86■■■■□ 3.17
ZC3H6P61129 AC110285.7-201ENST00000624417 1536 ntBASIC34.86■■■■□ 3.17
ZC3H6P61129 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
ZC3H6P61129 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC34.86■■■■□ 3.17
ZC3H6P61129 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC34.86■■■■□ 3.17
ZC3H6P61129 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC34.84■■■■□ 3.17
ZC3H6P61129 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC34.83■■■■□ 3.17
ZC3H6P61129 GFER-205ENST00000569451 517 ntTSL 5 BASIC34.83■■■■□ 3.17
ZC3H6P61129 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
ZC3H6P61129 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC34.82■■■■□ 3.16
ZC3H6P61129 AC148477.6-201ENST00000623746 465 ntBASIC34.82■■■■□ 3.16
ZC3H6P61129 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC34.81■■■■□ 3.16
ZC3H6P61129 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC34.81■■■■□ 3.16
ZC3H6P61129 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC34.81■■■■□ 3.16
ZC3H6P61129 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC34.8■■■■□ 3.16
ZC3H6P61129 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC34.79■■■■□ 3.16
ZC3H6P61129 KRT18P60-201ENST00000312876 1297 ntBASIC34.78■■■■□ 3.16
ZC3H6P61129 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC34.78■■■■□ 3.16
ZC3H6P61129 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC34.77■■■■□ 3.16
ZC3H6P61129 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC34.77■■■■□ 3.16
ZC3H6P61129 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
ZC3H6P61129 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC34.76■■■■□ 3.16
ZC3H6P61129 AC004987.1-201ENST00000428627 508 ntBASIC34.76■■■■□ 3.16
ZC3H6P61129 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
ZC3H6P61129 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC34.76■■■■□ 3.15
ZC3H6P61129 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC34.75■■■■□ 3.15
ZC3H6P61129 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
ZC3H6P61129 TSPY13P-201ENST00000338964 914 ntBASIC34.74■■■■□ 3.15
ZC3H6P61129 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC34.74■■■■□ 3.15
ZC3H6P61129 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
ZC3H6P61129 MIR219A2-201ENST00000608502 1504 ntBASIC34.73■■■■□ 3.15
ZC3H6P61129 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC34.73■■■■□ 3.15
ZC3H6P61129 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC34.73■■■■□ 3.15
ZC3H6P61129 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
ZC3H6P61129 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
ZC3H6P61129 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
ZC3H6P61129 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC34.71■■■■□ 3.15
ZC3H6P61129 ATP5G2P3-201ENST00000429083 425 ntBASIC34.71■■■■□ 3.15
ZC3H6P61129 AC092296.2-201ENST00000589470 999 ntBASIC34.71■■■■□ 3.15
ZC3H6P61129 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC34.71■■■■□ 3.15
ZC3H6P61129 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC34.7■■■■□ 3.15
ZC3H6P61129 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC34.7■■■■□ 3.14
ZC3H6P61129 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
ZC3H6P61129 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC34.67■■■■□ 3.14
ZC3H6P61129 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
ZC3H6P61129 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC34.67■■■■□ 3.14
ZC3H6P61129 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
ZC3H6P61129 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
ZC3H6P61129 RPS2-210ENST00000530225 765 ntTSL 2 BASIC34.66■■■■□ 3.14
ZC3H6P61129 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms