Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CLDN6P56747 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.92■■□□□ 1.58
CLDN6P56747 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.92■■□□□ 1.58
CLDN6P56747 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
CLDN6P56747 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.91■■□□□ 1.58
CLDN6P56747 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.9■■□□□ 1.58
CLDN6P56747 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
CLDN6P56747 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.9■■□□□ 1.58
CLDN6P56747 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CLDN6P56747 WHAMMP2-203ENST00000563942 1603 ntBASIC24.88■■□□□ 1.57
CLDN6P56747 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CLDN6P56747 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CLDN6P56747 U85056.1-201ENST00000616429 682 ntBASIC24.87■■□□□ 1.57
CLDN6P56747 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CLDN6P56747 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.86■■□□□ 1.57
CLDN6P56747 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
CLDN6P56747 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.86■■□□□ 1.57
CLDN6P56747 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.86■■□□□ 1.57
CLDN6P56747 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CLDN6P56747 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CLDN6P56747 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CLDN6P56747 AC127502.1-201ENST00000399971 1502 ntBASIC24.85■■□□□ 1.57
CLDN6P56747 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
CLDN6P56747 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CLDN6P56747 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CLDN6P56747 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CLDN6P56747 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CLDN6P56747 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.83■■□□□ 1.57
CLDN6P56747 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC24.83■■□□□ 1.57
CLDN6P56747 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
CLDN6P56747 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CLDN6P56747 AC018358.1-201ENST00000631079 1402 ntBASIC24.83■■□□□ 1.57
CLDN6P56747 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CLDN6P56747 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
CLDN6P56747 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
CLDN6P56747 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.81■■□□□ 1.56
CLDN6P56747 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.81■■□□□ 1.56
CLDN6P56747 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
CLDN6P56747 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.81■■□□□ 1.56
CLDN6P56747 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.8■■□□□ 1.56
CLDN6P56747 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.8■■□□□ 1.56
CLDN6P56747 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
CLDN6P56747 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.79■■□□□ 1.56
CLDN6P56747 AC135983.2-203ENST00000454486 1613 ntBASIC24.79■■□□□ 1.56
CLDN6P56747 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC24.78■■□□□ 1.56
CLDN6P56747 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CLDN6P56747 AC060814.1-201ENST00000554326 538 ntBASIC24.77■■□□□ 1.56
CLDN6P56747 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.77■■□□□ 1.56
CLDN6P56747 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.77■■□□□ 1.56
CLDN6P56747 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.77■■□□□ 1.56
CLDN6P56747 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.76■■□□□ 1.55
CLDN6P56747 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLDN6P56747 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.76■■□□□ 1.55
CLDN6P56747 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.76■■□□□ 1.55
CLDN6P56747 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLDN6P56747 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CLDN6P56747 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.75■■□□□ 1.55
CLDN6P56747 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CLDN6P56747 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CLDN6P56747 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.75■■□□□ 1.55
CLDN6P56747 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLDN6P56747 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.74■■□□□ 1.55
CLDN6P56747 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
CLDN6P56747 AC110285.7-201ENST00000624417 1536 ntBASIC24.74■■□□□ 1.55
CLDN6P56747 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CLDN6P56747 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CLDN6P56747 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CLDN6P56747 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CLDN6P56747 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.71■■□□□ 1.55
CLDN6P56747 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.71■■□□□ 1.55
CLDN6P56747 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
CLDN6P56747 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.7■■□□□ 1.55
CLDN6P56747 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC24.7■■□□□ 1.54
CLDN6P56747 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
CLDN6P56747 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.7■■□□□ 1.54
CLDN6P56747 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
CLDN6P56747 KRT18P60-201ENST00000312876 1297 ntBASIC24.69■■□□□ 1.54
CLDN6P56747 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.69■■□□□ 1.54
CLDN6P56747 AC004987.1-201ENST00000428627 508 ntBASIC24.69■■□□□ 1.54
CLDN6P56747 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CLDN6P56747 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.69■■□□□ 1.54
CLDN6P56747 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
CLDN6P56747 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.68■■□□□ 1.54
CLDN6P56747 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.68■■□□□ 1.54
CLDN6P56747 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.67■■□□□ 1.54
CLDN6P56747 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLDN6P56747 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLDN6P56747 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CLDN6P56747 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
CLDN6P56747 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
CLDN6P56747 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.65■■□□□ 1.54
CLDN6P56747 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CLDN6P56747 TSPY13P-201ENST00000338964 914 ntBASIC24.64■■□□□ 1.54
CLDN6P56747 ATP5G2P3-201ENST00000429083 425 ntBASIC24.64■■□□□ 1.54
CLDN6P56747 RARRES2P1-201ENST00000474487 481 ntBASIC24.64■■□□□ 1.54
CLDN6P56747 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CLDN6P56747 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CLDN6P56747 MIR219A2-201ENST00000608502 1504 ntBASIC24.63■■□□□ 1.53
CLDN6P56747 AC148477.6-201ENST00000623746 465 ntBASIC24.63■■□□□ 1.53
CLDN6P56747 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms