Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CMC4P56277 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CMC4P56277 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CMC4P56277 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.11■□□□□ 0.65
CMC4P56277 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CMC4P56277 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CMC4P56277 ABCB10P1-201ENST00000614297 2181 ntBASIC19.1■□□□□ 0.65
CMC4P56277 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.1■□□□□ 0.65
CMC4P56277 DUX4L13-201ENST00000554103 1267 ntBASIC19.09■□□□□ 0.65
CMC4P56277 DUX4L15-201ENST00000611059 1267 ntBASIC19.09■□□□□ 0.65
CMC4P56277 DUX4L23-201ENST00000615195 1269 ntBASIC19.09■□□□□ 0.65
CMC4P56277 DUX4L24-201ENST00000617576 1269 ntBASIC19.09■□□□□ 0.65
CMC4P56277 DUX4L22-201ENST00000618238 1269 ntBASIC19.09■□□□□ 0.65
CMC4P56277 DUX4L20-201ENST00000619712 1269 ntBASIC19.09■□□□□ 0.65
CMC4P56277 DUX4L21-201ENST00000622058 1269 ntBASIC19.09■□□□□ 0.65
CMC4P56277 DUX4L10-201ENST00000622460 1267 ntBASIC19.09■□□□□ 0.65
CMC4P56277 DUX4L25-201ENST00000624915 1269 ntBASIC19.09■□□□□ 0.65
CMC4P56277 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
CMC4P56277 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CMC4P56277 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC19.08■□□□□ 0.65
CMC4P56277 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.08■□□□□ 0.64
CMC4P56277 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CMC4P56277 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.08■□□□□ 0.64
CMC4P56277 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CMC4P56277 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CMC4P56277 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CMC4P56277 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
CMC4P56277 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.07■□□□□ 0.64
CMC4P56277 AL139393.2-201ENST00000608721 2025 ntBASIC19.07■□□□□ 0.64
CMC4P56277 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.07■□□□□ 0.64
CMC4P56277 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CMC4P56277 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.06■□□□□ 0.64
CMC4P56277 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.06■□□□□ 0.64
CMC4P56277 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.06■□□□□ 0.64
CMC4P56277 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CMC4P56277 WHAMMP2-203ENST00000563942 1603 ntBASIC19.06■□□□□ 0.64
CMC4P56277 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC19.06■□□□□ 0.64
CMC4P56277 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CMC4P56277 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC19.06■□□□□ 0.64
CMC4P56277 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CMC4P56277 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CMC4P56277 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CMC4P56277 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CMC4P56277 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CMC4P56277 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.05■□□□□ 0.64
CMC4P56277 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC19.05■□□□□ 0.64
CMC4P56277 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CMC4P56277 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CMC4P56277 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC19.03■□□□□ 0.64
CMC4P56277 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CMC4P56277 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CMC4P56277 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CMC4P56277 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CMC4P56277 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC19.02■□□□□ 0.64
CMC4P56277 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CMC4P56277 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CMC4P56277 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
CMC4P56277 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMC4P56277 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMC4P56277 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CMC4P56277 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMC4P56277 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMC4P56277 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CMC4P56277 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19■□□□□ 0.63
CMC4P56277 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CMC4P56277 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CMC4P56277 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CMC4P56277 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC19■□□□□ 0.63
CMC4P56277 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.99■□□□□ 0.63
CMC4P56277 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.99■□□□□ 0.63
CMC4P56277 AC008813.1-201ENST00000536597 885 ntBASIC18.99■□□□□ 0.63
CMC4P56277 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CMC4P56277 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.99■□□□□ 0.63
CMC4P56277 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CMC4P56277 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CMC4P56277 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
CMC4P56277 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CMC4P56277 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.98■□□□□ 0.63
CMC4P56277 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CMC4P56277 MIR3648-2-201ENST00000581792 180 ntBASIC18.98■□□□□ 0.63
CMC4P56277 MIR3648-1-201ENST00000615959 180 ntBASIC18.98■□□□□ 0.63
CMC4P56277 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.98■□□□□ 0.63
CMC4P56277 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CMC4P56277 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CMC4P56277 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.97■□□□□ 0.63
CMC4P56277 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMC4P56277 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMC4P56277 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.97■□□□□ 0.63
CMC4P56277 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.97■□□□□ 0.63
CMC4P56277 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMC4P56277 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CMC4P56277 AC110285.7-201ENST00000624417 1536 ntBASIC18.96■□□□□ 0.63
CMC4P56277 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CMC4P56277 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CMC4P56277 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CMC4P56277 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CMC4P56277 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.95■□□□□ 0.62
CMC4P56277 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CMC4P56277 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CMC4P56277 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms