Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC18.76■□□□□ 0.59
CKS2P33552 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CKS2P33552 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CKS2P33552 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CKS2P33552 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CKS2P33552 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CKS2P33552 AL449106.1-201ENST00000608517 1980 ntBASIC18.75■□□□□ 0.59
CKS2P33552 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CKS2P33552 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CKS2P33552 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CKS2P33552 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC18.75■□□□□ 0.59
CKS2P33552 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CKS2P33552 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CKS2P33552 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CKS2P33552 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CKS2P33552 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.74■□□□□ 0.59
CKS2P33552 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CKS2P33552 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CKS2P33552 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CKS2P33552 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
CKS2P33552 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CKS2P33552 AC006077.2-201ENST00000623591 457 ntBASIC18.73■□□□□ 0.59
CKS2P33552 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.73■□□□□ 0.59
CKS2P33552 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CKS2P33552 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CKS2P33552 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.72■□□□□ 0.59
CKS2P33552 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CKS2P33552 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CKS2P33552 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC18.72■□□□□ 0.59
CKS2P33552 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CKS2P33552 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.72■□□□□ 0.59
CKS2P33552 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CKS2P33552 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CKS2P33552 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CKS2P33552 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CKS2P33552 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CKS2P33552 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.71■□□□□ 0.59
CKS2P33552 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.71■□□□□ 0.59
CKS2P33552 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.71■□□□□ 0.58
CKS2P33552 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CKS2P33552 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKS2P33552 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CKS2P33552 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.69■□□□□ 0.58
CKS2P33552 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
CKS2P33552 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKS2P33552 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKS2P33552 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKS2P33552 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKS2P33552 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC18.69■□□□□ 0.58
CKS2P33552 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKS2P33552 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKS2P33552 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.67■□□□□ 0.58
CKS2P33552 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CKS2P33552 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CKS2P33552 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CKS2P33552 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CKS2P33552 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CKS2P33552 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CKS2P33552 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.66■□□□□ 0.58
CKS2P33552 AC010864.1-201ENST00000609407 1511 ntBASIC18.66■□□□□ 0.58
CKS2P33552 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CKS2P33552 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.66■□□□□ 0.58
CKS2P33552 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CKS2P33552 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CKS2P33552 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKS2P33552 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CKS2P33552 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CKS2P33552 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKS2P33552 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKS2P33552 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CKS2P33552 LINC01003-201ENST00000564834 1764 ntBASIC18.65■□□□□ 0.58
CKS2P33552 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CKS2P33552 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CKS2P33552 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CKS2P33552 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CKS2P33552 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CKS2P33552 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CKS2P33552 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.62■□□□□ 0.57
CKS2P33552 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CKS2P33552 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC18.61■□□□□ 0.57
CKS2P33552 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CKS2P33552 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
CKS2P33552 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKS2P33552 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKS2P33552 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.6■□□□□ 0.57
CKS2P33552 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKS2P33552 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKS2P33552 DYNLL1-208ENST00000550178 581 ntBASIC18.6■□□□□ 0.57
CKS2P33552 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CKS2P33552 AP004833.2-201ENST00000532228 1454 ntBASIC18.59■□□□□ 0.57
CKS2P33552 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
CKS2P33552 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CKS2P33552 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CKS2P33552 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CKS2P33552 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CKS2P33552 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.58■□□□□ 0.57
CKS2P33552 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC18.58■□□□□ 0.56
CKS2P33552 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CKS2P33552 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CKS2P33552 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms