Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SMIM17P0DL12 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SMIM17P0DL12 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC18.83■□□□□ 0.6
SMIM17P0DL12 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC18.83■□□□□ 0.6
SMIM17P0DL12 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SMIM17P0DL12 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM17P0DL12 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM17P0DL12 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.82■□□□□ 0.6
SMIM17P0DL12 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SMIM17P0DL12 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM17P0DL12 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.82■□□□□ 0.6
SMIM17P0DL12 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM17P0DL12 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SMIM17P0DL12 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM17P0DL12 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM17P0DL12 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM17P0DL12 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM17P0DL12 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM17P0DL12 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM17P0DL12 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM17P0DL12 KLF16-203ENST00000592313 508 ntTSL 3 BASIC18.81■□□□□ 0.6
SMIM17P0DL12 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.81■□□□□ 0.6
SMIM17P0DL12 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SMIM17P0DL12 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
SMIM17P0DL12 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.8■□□□□ 0.6
SMIM17P0DL12 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SMIM17P0DL12 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM17P0DL12 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM17P0DL12 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SMIM17P0DL12 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.78■□□□□ 0.6
SMIM17P0DL12 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM17P0DL12 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SMIM17P0DL12 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SMIM17P0DL12 AC010864.1-201ENST00000609407 1511 ntBASIC18.78■□□□□ 0.6
SMIM17P0DL12 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SMIM17P0DL12 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM17P0DL12 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM17P0DL12 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.77■□□□□ 0.6
SMIM17P0DL12 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM17P0DL12 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM17P0DL12 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SMIM17P0DL12 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SMIM17P0DL12 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM17P0DL12 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SMIM17P0DL12 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM17P0DL12 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM17P0DL12 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
SMIM17P0DL12 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.76■□□□□ 0.59
SMIM17P0DL12 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM17P0DL12 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM17P0DL12 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM17P0DL12 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SMIM17P0DL12 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM17P0DL12 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.74■□□□□ 0.59
SMIM17P0DL12 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM17P0DL12 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC18.74■□□□□ 0.59
SMIM17P0DL12 AL133380.1-201ENST00000506013 324 ntBASIC18.74■□□□□ 0.59
SMIM17P0DL12 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SMIM17P0DL12 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM17P0DL12 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM17P0DL12 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC18.73■□□□□ 0.59
SMIM17P0DL12 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM17P0DL12 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM17P0DL12 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMIM17P0DL12 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.72■□□□□ 0.59
SMIM17P0DL12 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMIM17P0DL12 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SMIM17P0DL12 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SMIM17P0DL12 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SMIM17P0DL12 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.71■□□□□ 0.59
SMIM17P0DL12 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SMIM17P0DL12 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM17P0DL12 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.7■□□□□ 0.58
SMIM17P0DL12 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
SMIM17P0DL12 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SMIM17P0DL12 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM17P0DL12 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SMIM17P0DL12 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SMIM17P0DL12 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM17P0DL12 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SMIM17P0DL12 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM17P0DL12 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM17P0DL12 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM17P0DL12 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.68■□□□□ 0.58
SMIM17P0DL12 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM17P0DL12 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.68■□□□□ 0.58
SMIM17P0DL12 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SMIM17P0DL12 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SMIM17P0DL12 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.67■□□□□ 0.58
SMIM17P0DL12 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM17P0DL12 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.67■□□□□ 0.58
SMIM17P0DL12 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SMIM17P0DL12 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SMIM17P0DL12 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM17P0DL12 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SMIM17P0DL12 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM17P0DL12 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SMIM17P0DL12 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM17P0DL12 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SMIM17P0DL12 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms