Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
HMGCRP04035 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
HMGCRP04035 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
HMGCRP04035 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
HMGCRP04035 AC010864.1-201ENST00000609407 1511 ntBASIC29.44■■■□□ 2.3
HMGCRP04035 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
HMGCRP04035 U85056.1-201ENST00000616429 682 ntBASIC29.43■■■□□ 2.3
HMGCRP04035 AL161658.1-201ENST00000623641 1967 ntBASIC29.43■■■□□ 2.3
HMGCRP04035 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
HMGCRP04035 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
HMGCRP04035 HYI-213ENST00000583037 1322 ntTSL 5 BASIC29.42■■■□□ 2.3
HMGCRP04035 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.4■■■□□ 2.3
HMGCRP04035 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
HMGCRP04035 CHST11-203ENST00000547956 936 ntTSL 2 BASIC29.39■■■□□ 2.3
HMGCRP04035 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC29.38■■■□□ 2.29
HMGCRP04035 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
HMGCRP04035 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
HMGCRP04035 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
HMGCRP04035 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC29.38■■■□□ 2.29
HMGCRP04035 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC29.37■■■□□ 2.29
HMGCRP04035 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.37■■■□□ 2.29
HMGCRP04035 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC29.36■■■□□ 2.29
HMGCRP04035 AC060814.1-201ENST00000554326 538 ntBASIC29.36■■■□□ 2.29
HMGCRP04035 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
HMGCRP04035 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
HMGCRP04035 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC29.35■■■□□ 2.29
HMGCRP04035 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
HMGCRP04035 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
HMGCRP04035 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.32■■■□□ 2.28
HMGCRP04035 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.32■■■□□ 2.28
HMGCRP04035 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
HMGCRP04035 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC29.32■■■□□ 2.28
HMGCRP04035 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC29.32■■■□□ 2.28
HMGCRP04035 TSPY13P-201ENST00000338964 914 ntBASIC29.31■■■□□ 2.28
HMGCRP04035 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC29.31■■■□□ 2.28
HMGCRP04035 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC29.31■■■□□ 2.28
HMGCRP04035 GFER-205ENST00000569451 517 ntTSL 5 BASIC29.31■■■□□ 2.28
HMGCRP04035 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
HMGCRP04035 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
HMGCRP04035 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
HMGCRP04035 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC29.3■■■□□ 2.28
HMGCRP04035 AC148477.6-201ENST00000623746 465 ntBASIC29.29■■■□□ 2.28
HMGCRP04035 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
HMGCRP04035 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC29.28■■■□□ 2.28
HMGCRP04035 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
HMGCRP04035 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
HMGCRP04035 AC135983.2-203ENST00000454486 1613 ntBASIC29.27■■■□□ 2.28
HMGCRP04035 WHAMMP2-203ENST00000563942 1603 ntBASIC29.27■■■□□ 2.28
HMGCRP04035 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
HMGCRP04035 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC29.27■■■□□ 2.28
HMGCRP04035 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
HMGCRP04035 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC29.26■■■□□ 2.27
HMGCRP04035 KRT18P60-201ENST00000312876 1297 ntBASIC29.25■■■□□ 2.27
HMGCRP04035 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
HMGCRP04035 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
HMGCRP04035 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
HMGCRP04035 AC004987.1-201ENST00000428627 508 ntBASIC29.24■■■□□ 2.27
HMGCRP04035 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
HMGCRP04035 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC29.23■■■□□ 2.27
HMGCRP04035 ATP5G2P3-201ENST00000429083 425 ntBASIC29.23■■■□□ 2.27
HMGCRP04035 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
HMGCRP04035 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC29.23■■■□□ 2.27
HMGCRP04035 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC29.23■■■□□ 2.27
HMGCRP04035 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
HMGCRP04035 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.22■■■□□ 2.27
HMGCRP04035 AC127502.1-201ENST00000399971 1502 ntBASIC29.22■■■□□ 2.27
HMGCRP04035 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
HMGCRP04035 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC29.22■■■□□ 2.27
HMGCRP04035 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC29.22■■■□□ 2.27
HMGCRP04035 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC29.22■■■□□ 2.27
HMGCRP04035 AC110285.7-201ENST00000624417 1536 ntBASIC29.21■■■□□ 2.27
HMGCRP04035 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
HMGCRP04035 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
HMGCRP04035 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
HMGCRP04035 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC29.2■■■□□ 2.27
HMGCRP04035 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
HMGCRP04035 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC29.2■■■□□ 2.26
HMGCRP04035 AC092296.2-201ENST00000589470 999 ntBASIC29.2■■■□□ 2.26
HMGCRP04035 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.2■■■□□ 2.26
HMGCRP04035 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.19■■■□□ 2.26
HMGCRP04035 RARRES2P1-201ENST00000474487 481 ntBASIC29.19■■■□□ 2.26
HMGCRP04035 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC29.19■■■□□ 2.26
HMGCRP04035 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
HMGCRP04035 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC29.18■■■□□ 2.26
HMGCRP04035 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
HMGCRP04035 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
HMGCRP04035 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC29.18■■■□□ 2.26
HMGCRP04035 GUK1-208ENST00000366728 842 ntTSL 2 BASIC29.18■■■□□ 2.26
HMGCRP04035 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC29.17■■■□□ 2.26
HMGCRP04035 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
HMGCRP04035 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC29.16■■■□□ 2.26
HMGCRP04035 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
HMGCRP04035 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC29.14■■■□□ 2.26
HMGCRP04035 RPS2-210ENST00000530225 765 ntTSL 2 BASIC29.14■■■□□ 2.26
HMGCRP04035 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.26
HMGCRP04035 MIR219A2-201ENST00000608502 1504 ntBASIC29.14■■■□□ 2.25
HMGCRP04035 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
HMGCRP04035 ECEL1P2-201ENST00000461596 1295 ntBASIC29.12■■■□□ 2.25
HMGCRP04035 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
HMGCRP04035 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC29.12■■■□□ 2.25
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms