Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 HES4-202ENST00000428771 1040 ntTSL 2 BASIC21.27■■□□□ 1
TGFAP01135 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC21.27■■□□□ 1
TGFAP01135 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
TGFAP01135 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.27■■□□□ 1
TGFAP01135 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.27■■□□□ 1
TGFAP01135 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TGFAP01135 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TGFAP01135 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TGFAP01135 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC21.25■□□□□ 0.99
TGFAP01135 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TGFAP01135 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TGFAP01135 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
TGFAP01135 AC135983.2-203ENST00000454486 1613 ntBASIC21.23■□□□□ 0.99
TGFAP01135 WHAMMP2-203ENST00000563942 1603 ntBASIC21.23■□□□□ 0.99
TGFAP01135 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TGFAP01135 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TGFAP01135 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TGFAP01135 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
TGFAP01135 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TGFAP01135 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
TGFAP01135 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TGFAP01135 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TGFAP01135 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.22■□□□□ 0.99
TGFAP01135 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.21■□□□□ 0.99
TGFAP01135 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TGFAP01135 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TGFAP01135 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.2■□□□□ 0.98
TGFAP01135 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TGFAP01135 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TGFAP01135 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TGFAP01135 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
TGFAP01135 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TGFAP01135 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.19■□□□□ 0.98
TGFAP01135 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TGFAP01135 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.18■□□□□ 0.98
TGFAP01135 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.18■□□□□ 0.98
TGFAP01135 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21.18■□□□□ 0.98
TGFAP01135 NTF6A-201ENST00000591175 560 ntBASIC21.18■□□□□ 0.98
TGFAP01135 AC110285.7-201ENST00000624417 1536 ntBASIC21.18■□□□□ 0.98
TGFAP01135 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TGFAP01135 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TGFAP01135 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TGFAP01135 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TGFAP01135 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TGFAP01135 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TGFAP01135 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC21.15■□□□□ 0.98
TGFAP01135 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TGFAP01135 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TGFAP01135 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TGFAP01135 AC012354.3-201ENST00000623734 483 ntBASIC21.14■□□□□ 0.97
TGFAP01135 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TGFAP01135 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
TGFAP01135 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.13■□□□□ 0.97
TGFAP01135 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TGFAP01135 AL135925.1-201ENST00000605920 1701 ntBASIC21.13■□□□□ 0.97
TGFAP01135 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.13■□□□□ 0.97
TGFAP01135 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TGFAP01135 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
TGFAP01135 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.12■□□□□ 0.97
TGFAP01135 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21.12■□□□□ 0.97
TGFAP01135 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TGFAP01135 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
TGFAP01135 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.11■□□□□ 0.97
TGFAP01135 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TGFAP01135 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TGFAP01135 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TGFAP01135 AC148477.6-201ENST00000623746 465 ntBASIC21.09■□□□□ 0.97
TGFAP01135 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TGFAP01135 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.08■□□□□ 0.97
TGFAP01135 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TGFAP01135 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.08■□□□□ 0.96
TGFAP01135 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TGFAP01135 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TGFAP01135 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TGFAP01135 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
TGFAP01135 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TGFAP01135 AC060814.1-201ENST00000554326 538 ntBASIC21.06■□□□□ 0.96
TGFAP01135 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.06■□□□□ 0.96
TGFAP01135 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TGFAP01135 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TGFAP01135 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TGFAP01135 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.06■□□□□ 0.96
TGFAP01135 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC21.05■□□□□ 0.96
TGFAP01135 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TGFAP01135 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TGFAP01135 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
TGFAP01135 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TGFAP01135 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.04■□□□□ 0.96
TGFAP01135 MIR219A2-201ENST00000608502 1504 ntBASIC21.04■□□□□ 0.96
TGFAP01135 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.04■□□□□ 0.96
TGFAP01135 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
TGFAP01135 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TGFAP01135 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.03■□□□□ 0.96
TGFAP01135 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
TGFAP01135 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TGFAP01135 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TGFAP01135 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TGFAP01135 AL033527.3-201ENST00000566366 1196 ntBASIC21.02■□□□□ 0.96
TGFAP01135 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
TGFAP01135 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms