Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.4■■■□□ 2.46
CTNND1O60716 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CTNND1O60716 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.45
CTNND1O60716 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.39■■■□□ 2.45
CTNND1O60716 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
CTNND1O60716 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
CTNND1O60716 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.38■■■□□ 2.45
CTNND1O60716 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CTNND1O60716 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
CTNND1O60716 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.37■■■□□ 2.45
CTNND1O60716 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
CTNND1O60716 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CTNND1O60716 AC022413.1-201ENST00000624602 984 ntBASIC30.37■■■□□ 2.45
CTNND1O60716 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
CTNND1O60716 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
CTNND1O60716 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
CTNND1O60716 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC30.36■■■□□ 2.45
CTNND1O60716 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
CTNND1O60716 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
CTNND1O60716 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
CTNND1O60716 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CTNND1O60716 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC30.34■■■□□ 2.45
CTNND1O60716 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CTNND1O60716 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.33■■■□□ 2.45
CTNND1O60716 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CTNND1O60716 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CTNND1O60716 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
CTNND1O60716 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
CTNND1O60716 HES4-202ENST00000428771 1040 ntTSL 2 BASIC30.3■■■□□ 2.44
CTNND1O60716 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.3■■■□□ 2.44
CTNND1O60716 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CTNND1O60716 AC110285.7-201ENST00000624417 1536 ntBASIC30.29■■■□□ 2.44
CTNND1O60716 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CTNND1O60716 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
CTNND1O60716 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
CTNND1O60716 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CTNND1O60716 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
CTNND1O60716 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.28■■■□□ 2.44
CTNND1O60716 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CTNND1O60716 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC30.28■■■□□ 2.44
CTNND1O60716 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC30.28■■■□□ 2.44
CTNND1O60716 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
CTNND1O60716 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
CTNND1O60716 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
CTNND1O60716 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
CTNND1O60716 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC30.26■■■□□ 2.43
CTNND1O60716 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
CTNND1O60716 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
CTNND1O60716 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.24■■■□□ 2.43
CTNND1O60716 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
CTNND1O60716 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.23■■■□□ 2.43
CTNND1O60716 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.23■■■□□ 2.43
CTNND1O60716 AC148477.6-201ENST00000623746 465 ntBASIC30.23■■■□□ 2.43
CTNND1O60716 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC30.21■■■□□ 2.43
CTNND1O60716 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
CTNND1O60716 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
CTNND1O60716 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
CTNND1O60716 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CTNND1O60716 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.19■■■□□ 2.42
CTNND1O60716 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
CTNND1O60716 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
CTNND1O60716 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
CTNND1O60716 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.18■■■□□ 2.42
CTNND1O60716 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
CTNND1O60716 RPS2-210ENST00000530225 765 ntTSL 2 BASIC30.18■■■□□ 2.42
CTNND1O60716 NTF6A-201ENST00000591175 560 ntBASIC30.18■■■□□ 2.42
CTNND1O60716 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.17■■■□□ 2.42
CTNND1O60716 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
CTNND1O60716 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.17■■■□□ 2.42
CTNND1O60716 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
CTNND1O60716 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
CTNND1O60716 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
CTNND1O60716 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
CTNND1O60716 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.14■■■□□ 2.42
CTNND1O60716 PEX7-203ENST00000541292 945 ntTSL 5 BASIC30.14■■■□□ 2.42
CTNND1O60716 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC30.13■■■□□ 2.41
CTNND1O60716 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.13■■■□□ 2.41
CTNND1O60716 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.13■■■□□ 2.41
CTNND1O60716 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
CTNND1O60716 AC060814.1-201ENST00000554326 538 ntBASIC30.12■■■□□ 2.41
CTNND1O60716 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC30.12■■■□□ 2.41
CTNND1O60716 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CTNND1O60716 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
CTNND1O60716 MEST-211ENST00000437945 1455 ntTSL 5 BASIC30.12■■■□□ 2.41
CTNND1O60716 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CTNND1O60716 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
CTNND1O60716 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
CTNND1O60716 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CTNND1O60716 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
CTNND1O60716 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CTNND1O60716 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CTNND1O60716 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CTNND1O60716 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CTNND1O60716 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
CTNND1O60716 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.1■■■□□ 2.41
CTNND1O60716 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CTNND1O60716 MIR219A2-201ENST00000608502 1504 ntBASIC30.1■■■□□ 2.41
CTNND1O60716 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CTNND1O60716 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.1■■■□□ 2.41
CTNND1O60716 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms