Protein–RNA interactions for Protein: O14788

TNFSF11, Tumor necrosis factor ligand superfamily member 11, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF11O14788 AC139426.1-201ENST00000568218 2529 ntBASIC23.1■■□□□ 1.29
TNFSF11O14788 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TNFSF11O14788 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
TNFSF11O14788 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.09■■□□□ 1.29
TNFSF11O14788 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
TNFSF11O14788 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
TNFSF11O14788 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
TNFSF11O14788 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.08■■□□□ 1.28
TNFSF11O14788 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TNFSF11O14788 AP004833.2-201ENST00000532228 1454 ntBASIC23.07■■□□□ 1.28
TNFSF11O14788 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
TNFSF11O14788 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
TNFSF11O14788 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
TNFSF11O14788 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
TNFSF11O14788 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TNFSF11O14788 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
TNFSF11O14788 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
TNFSF11O14788 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.06■■□□□ 1.28
TNFSF11O14788 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
TNFSF11O14788 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC23.05■■□□□ 1.28
TNFSF11O14788 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.05■■□□□ 1.28
TNFSF11O14788 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.05■■□□□ 1.28
TNFSF11O14788 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
TNFSF11O14788 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.05■■□□□ 1.28
TNFSF11O14788 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
TNFSF11O14788 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
TNFSF11O14788 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
TNFSF11O14788 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNFSF11O14788 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.03■■□□□ 1.28
TNFSF11O14788 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNFSF11O14788 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.03■■□□□ 1.28
TNFSF11O14788 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNFSF11O14788 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNFSF11O14788 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNFSF11O14788 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
TNFSF11O14788 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.03■■□□□ 1.28
TNFSF11O14788 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.03■■□□□ 1.28
TNFSF11O14788 DUX4L13-201ENST00000554103 1267 ntBASIC23.03■■□□□ 1.28
TNFSF11O14788 DUX4L15-201ENST00000611059 1267 ntBASIC23.03■■□□□ 1.28
TNFSF11O14788 DUX4L23-201ENST00000615195 1269 ntBASIC23.03■■□□□ 1.28
TNFSF11O14788 DUX4L24-201ENST00000617576 1269 ntBASIC23.03■■□□□ 1.28
TNFSF11O14788 DUX4L22-201ENST00000618238 1269 ntBASIC23.03■■□□□ 1.28
TNFSF11O14788 DUX4L20-201ENST00000619712 1269 ntBASIC23.03■■□□□ 1.28
TNFSF11O14788 DUX4L21-201ENST00000622058 1269 ntBASIC23.03■■□□□ 1.28
TNFSF11O14788 DUX4L10-201ENST00000622460 1267 ntBASIC23.03■■□□□ 1.28
TNFSF11O14788 DUX4L25-201ENST00000624915 1269 ntBASIC23.03■■□□□ 1.28
TNFSF11O14788 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
TNFSF11O14788 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
TNFSF11O14788 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.01■■□□□ 1.27
TNFSF11O14788 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.01■■□□□ 1.27
TNFSF11O14788 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.01■■□□□ 1.27
TNFSF11O14788 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
TNFSF11O14788 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
TNFSF11O14788 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TNFSF11O14788 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23■■□□□ 1.27
TNFSF11O14788 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23■■□□□ 1.27
TNFSF11O14788 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23■■□□□ 1.27
TNFSF11O14788 MIR3648-2-201ENST00000581792 180 ntBASIC23■■□□□ 1.27
TNFSF11O14788 MIR3648-1-201ENST00000615959 180 ntBASIC23■■□□□ 1.27
TNFSF11O14788 CR559946.2-201ENST00000623684 991 ntBASIC23■■□□□ 1.27
TNFSF11O14788 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23■■□□□ 1.27
TNFSF11O14788 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23■■□□□ 1.27
TNFSF11O14788 AC100797.4-201ENST00000631653 1827 ntBASIC23■■□□□ 1.27
TNFSF11O14788 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23■■□□□ 1.27
TNFSF11O14788 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.99■■□□□ 1.27
TNFSF11O14788 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TNFSF11O14788 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.98■■□□□ 1.27
TNFSF11O14788 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.98■■□□□ 1.27
TNFSF11O14788 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TNFSF11O14788 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TNFSF11O14788 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.97■■□□□ 1.27
TNFSF11O14788 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.97■■□□□ 1.27
TNFSF11O14788 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TNFSF11O14788 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
TNFSF11O14788 AC016575.1-201ENST00000607026 382 ntBASIC22.97■■□□□ 1.27
TNFSF11O14788 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
TNFSF11O14788 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.97■■□□□ 1.27
TNFSF11O14788 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.97■■□□□ 1.27
TNFSF11O14788 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TNFSF11O14788 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TNFSF11O14788 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC22.96■■□□□ 1.27
TNFSF11O14788 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
TNFSF11O14788 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.96■■□□□ 1.27
TNFSF11O14788 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC22.96■■□□□ 1.27
TNFSF11O14788 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TNFSF11O14788 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
TNFSF11O14788 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TNFSF11O14788 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TNFSF11O14788 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.95■■□□□ 1.26
TNFSF11O14788 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.94■■□□□ 1.26
TNFSF11O14788 HLA-V-202ENST00000446817 847 ntBASIC22.94■■□□□ 1.26
TNFSF11O14788 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TNFSF11O14788 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.93■■□□□ 1.26
TNFSF11O14788 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC22.92■■□□□ 1.26
TNFSF11O14788 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.92■■□□□ 1.26
TNFSF11O14788 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.92■■□□□ 1.26
TNFSF11O14788 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TNFSF11O14788 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TNFSF11O14788 AC110285.7-201ENST00000624417 1536 ntBASIC22.92■■□□□ 1.26
TNFSF11O14788 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms