Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
TLR4O00206 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
TLR4O00206 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.56■■□□□ 1.68
TLR4O00206 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.56■■□□□ 1.68
TLR4O00206 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.56■■□□□ 1.68
TLR4O00206 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
TLR4O00206 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC25.55■■□□□ 1.68
TLR4O00206 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
TLR4O00206 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TLR4O00206 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.54■■□□□ 1.68
TLR4O00206 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.54■■□□□ 1.68
TLR4O00206 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.53■■□□□ 1.68
TLR4O00206 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.53■■□□□ 1.68
TLR4O00206 GPX1-201ENST00000419349 1106 ntBASIC25.53■■□□□ 1.68
TLR4O00206 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
TLR4O00206 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
TLR4O00206 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
TLR4O00206 AC135983.2-203ENST00000454486 1613 ntBASIC25.51■■□□□ 1.67
TLR4O00206 AL135925.1-201ENST00000605920 1701 ntBASIC25.51■■□□□ 1.67
TLR4O00206 RARRES2P2-201ENST00000394842 485 ntBASIC25.5■■□□□ 1.67
TLR4O00206 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
TLR4O00206 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC25.5■■□□□ 1.67
TLR4O00206 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC25.5■■□□□ 1.67
TLR4O00206 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
TLR4O00206 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
TLR4O00206 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TLR4O00206 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TLR4O00206 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.49■■□□□ 1.67
TLR4O00206 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
TLR4O00206 WHAMMP2-203ENST00000563942 1603 ntBASIC25.48■■□□□ 1.67
TLR4O00206 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
TLR4O00206 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.48■■□□□ 1.67
TLR4O00206 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
TLR4O00206 AC008813.1-201ENST00000536597 885 ntBASIC25.48■■□□□ 1.67
TLR4O00206 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC25.48■■□□□ 1.67
TLR4O00206 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
TLR4O00206 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.47■■□□□ 1.67
TLR4O00206 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
TLR4O00206 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
TLR4O00206 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.46■■□□□ 1.67
TLR4O00206 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.67
TLR4O00206 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
TLR4O00206 RNF126P1-201ENST00000567452 1320 ntBASIC25.44■■□□□ 1.66
TLR4O00206 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TLR4O00206 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
TLR4O00206 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.44■■□□□ 1.66
TLR4O00206 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TLR4O00206 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TLR4O00206 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.43■■□□□ 1.66
TLR4O00206 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TLR4O00206 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.42■■□□□ 1.66
TLR4O00206 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TLR4O00206 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
TLR4O00206 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TLR4O00206 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
TLR4O00206 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
TLR4O00206 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TLR4O00206 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
TLR4O00206 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.4■■□□□ 1.66
TLR4O00206 ABHD17AP5-201ENST00000580133 923 ntBASIC25.4■■□□□ 1.66
TLR4O00206 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
TLR4O00206 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.39■■□□□ 1.66
TLR4O00206 AC022413.1-201ENST00000624602 984 ntBASIC25.39■■□□□ 1.66
TLR4O00206 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.38■■□□□ 1.65
TLR4O00206 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TLR4O00206 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TLR4O00206 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TLR4O00206 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TLR4O00206 AC110285.7-201ENST00000624417 1536 ntBASIC25.37■■□□□ 1.65
TLR4O00206 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TLR4O00206 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
TLR4O00206 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TLR4O00206 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.36■■□□□ 1.65
TLR4O00206 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TLR4O00206 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TLR4O00206 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TLR4O00206 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC25.35■■□□□ 1.65
TLR4O00206 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC25.34■■□□□ 1.65
TLR4O00206 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.34■■□□□ 1.65
TLR4O00206 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TLR4O00206 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.33■■□□□ 1.65
TLR4O00206 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
TLR4O00206 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.33■■□□□ 1.65
TLR4O00206 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
TLR4O00206 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
TLR4O00206 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TLR4O00206 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TLR4O00206 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
TLR4O00206 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
TLR4O00206 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC25.32■■□□□ 1.64
TLR4O00206 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.31■■□□□ 1.64
TLR4O00206 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
TLR4O00206 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.31■■□□□ 1.64
TLR4O00206 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.31■■□□□ 1.64
TLR4O00206 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TLR4O00206 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
TLR4O00206 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
TLR4O00206 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
TLR4O00206 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
TLR4O00206 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.28■■□□□ 1.64
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms