Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC01548A6NM66 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
LINC01548A6NM66 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC01548A6NM66 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LINC01548A6NM66 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.33■□□□□ 0.85
LINC01548A6NM66 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.33■□□□□ 0.85
LINC01548A6NM66 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
LINC01548A6NM66 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
LINC01548A6NM66 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
LINC01548A6NM66 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LINC01548A6NM66 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.32■□□□□ 0.84
LINC01548A6NM66 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LINC01548A6NM66 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC01548A6NM66 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LINC01548A6NM66 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.3■□□□□ 0.84
LINC01548A6NM66 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.3■□□□□ 0.84
LINC01548A6NM66 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LINC01548A6NM66 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.29■□□□□ 0.84
LINC01548A6NM66 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LINC01548A6NM66 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC01548A6NM66 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.29■□□□□ 0.84
LINC01548A6NM66 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LINC01548A6NM66 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.28■□□□□ 0.84
LINC01548A6NM66 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC01548A6NM66 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.28■□□□□ 0.84
LINC01548A6NM66 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC20.28■□□□□ 0.84
LINC01548A6NM66 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC01548A6NM66 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.28■□□□□ 0.84
LINC01548A6NM66 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LINC01548A6NM66 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.27■□□□□ 0.84
LINC01548A6NM66 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.27■□□□□ 0.84
LINC01548A6NM66 AC100797.4-201ENST00000631653 1827 ntBASIC20.27■□□□□ 0.84
LINC01548A6NM66 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.27■□□□□ 0.83
LINC01548A6NM66 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
LINC01548A6NM66 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.26■□□□□ 0.83
LINC01548A6NM66 DUX4L13-201ENST00000554103 1267 ntBASIC20.26■□□□□ 0.83
LINC01548A6NM66 DUX4L15-201ENST00000611059 1267 ntBASIC20.26■□□□□ 0.83
LINC01548A6NM66 DUX4L23-201ENST00000615195 1269 ntBASIC20.26■□□□□ 0.83
LINC01548A6NM66 DUX4L24-201ENST00000617576 1269 ntBASIC20.26■□□□□ 0.83
LINC01548A6NM66 DUX4L22-201ENST00000618238 1269 ntBASIC20.26■□□□□ 0.83
LINC01548A6NM66 DUX4L20-201ENST00000619712 1269 ntBASIC20.26■□□□□ 0.83
LINC01548A6NM66 DUX4L21-201ENST00000622058 1269 ntBASIC20.26■□□□□ 0.83
LINC01548A6NM66 DUX4L10-201ENST00000622460 1267 ntBASIC20.26■□□□□ 0.83
LINC01548A6NM66 DUX4L25-201ENST00000624915 1269 ntBASIC20.26■□□□□ 0.83
LINC01548A6NM66 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LINC01548A6NM66 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC20.26■□□□□ 0.83
LINC01548A6NM66 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01548A6NM66 AP004833.2-201ENST00000532228 1454 ntBASIC20.25■□□□□ 0.83
LINC01548A6NM66 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01548A6NM66 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.25■□□□□ 0.83
LINC01548A6NM66 MIR3648-2-201ENST00000581792 180 ntBASIC20.25■□□□□ 0.83
LINC01548A6NM66 MIR3648-1-201ENST00000615959 180 ntBASIC20.25■□□□□ 0.83
LINC01548A6NM66 CR559946.2-201ENST00000623684 991 ntBASIC20.25■□□□□ 0.83
LINC01548A6NM66 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.25■□□□□ 0.83
LINC01548A6NM66 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LINC01548A6NM66 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LINC01548A6NM66 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.25■□□□□ 0.83
LINC01548A6NM66 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LINC01548A6NM66 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.25■□□□□ 0.83
LINC01548A6NM66 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.24■□□□□ 0.83
LINC01548A6NM66 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01548A6NM66 AC016575.1-201ENST00000607026 382 ntBASIC20.24■□□□□ 0.83
LINC01548A6NM66 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01548A6NM66 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.24■□□□□ 0.83
LINC01548A6NM66 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.24■□□□□ 0.83
LINC01548A6NM66 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01548A6NM66 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01548A6NM66 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LINC01548A6NM66 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LINC01548A6NM66 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC01548A6NM66 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC01548A6NM66 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
LINC01548A6NM66 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC01548A6NM66 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LINC01548A6NM66 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.23■□□□□ 0.83
LINC01548A6NM66 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
LINC01548A6NM66 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC20.22■□□□□ 0.83
LINC01548A6NM66 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.22■□□□□ 0.83
LINC01548A6NM66 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
LINC01548A6NM66 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.21■□□□□ 0.83
LINC01548A6NM66 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.21■□□□□ 0.83
LINC01548A6NM66 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.21■□□□□ 0.83
LINC01548A6NM66 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
LINC01548A6NM66 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LINC01548A6NM66 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.2■□□□□ 0.82
LINC01548A6NM66 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC01548A6NM66 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.2■□□□□ 0.82
LINC01548A6NM66 MBP-237ENST00000579129 1052 ntTSL 5 BASIC20.2■□□□□ 0.82
LINC01548A6NM66 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC01548A6NM66 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LINC01548A6NM66 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC01548A6NM66 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LINC01548A6NM66 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LINC01548A6NM66 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
LINC01548A6NM66 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.19■□□□□ 0.82
LINC01548A6NM66 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.19■□□□□ 0.82
LINC01548A6NM66 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.19■□□□□ 0.82
LINC01548A6NM66 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.19■□□□□ 0.82
LINC01548A6NM66 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.19■□□□□ 0.82
LINC01548A6NM66 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 9.8 ms