Protein–RNA interactions for Protein: A6NGZ8

SMIM9, Small integral membrane protein 9, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9A6NGZ8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SMIM9A6NGZ8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SMIM9A6NGZ8 AL139393.2-201ENST00000608721 2025 ntBASIC18.54■□□□□ 0.56
SMIM9A6NGZ8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMIM9A6NGZ8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
SMIM9A6NGZ8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.53■□□□□ 0.56
SMIM9A6NGZ8 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.53■□□□□ 0.56
SMIM9A6NGZ8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SMIM9A6NGZ8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMIM9A6NGZ8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMIM9A6NGZ8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SMIM9A6NGZ8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.52■□□□□ 0.56
SMIM9A6NGZ8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
SMIM9A6NGZ8 WHAMMP2-203ENST00000563942 1603 ntBASIC18.52■□□□□ 0.55
SMIM9A6NGZ8 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM9A6NGZ8 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.51■□□□□ 0.55
SMIM9A6NGZ8 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.51■□□□□ 0.55
SMIM9A6NGZ8 DUX4L13-201ENST00000554103 1267 ntBASIC18.51■□□□□ 0.55
SMIM9A6NGZ8 DUX4L15-201ENST00000611059 1267 ntBASIC18.51■□□□□ 0.55
SMIM9A6NGZ8 DUX4L23-201ENST00000615195 1269 ntBASIC18.51■□□□□ 0.55
SMIM9A6NGZ8 DUX4L24-201ENST00000617576 1269 ntBASIC18.51■□□□□ 0.55
SMIM9A6NGZ8 DUX4L22-201ENST00000618238 1269 ntBASIC18.51■□□□□ 0.55
SMIM9A6NGZ8 DUX4L20-201ENST00000619712 1269 ntBASIC18.51■□□□□ 0.55
SMIM9A6NGZ8 DUX4L21-201ENST00000622058 1269 ntBASIC18.51■□□□□ 0.55
SMIM9A6NGZ8 DUX4L10-201ENST00000622460 1267 ntBASIC18.51■□□□□ 0.55
SMIM9A6NGZ8 DUX4L25-201ENST00000624915 1269 ntBASIC18.51■□□□□ 0.55
SMIM9A6NGZ8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM9A6NGZ8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM9A6NGZ8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.51■□□□□ 0.55
SMIM9A6NGZ8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SMIM9A6NGZ8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC18.5■□□□□ 0.55
SMIM9A6NGZ8 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.5■□□□□ 0.55
SMIM9A6NGZ8 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.5■□□□□ 0.55
SMIM9A6NGZ8 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM9A6NGZ8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM9A6NGZ8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM9A6NGZ8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC18.49■□□□□ 0.55
SMIM9A6NGZ8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.49■□□□□ 0.55
SMIM9A6NGZ8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM9A6NGZ8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.49■□□□□ 0.55
SMIM9A6NGZ8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMIM9A6NGZ8 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SMIM9A6NGZ8 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMIM9A6NGZ8 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM9A6NGZ8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
SMIM9A6NGZ8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.46■□□□□ 0.55
SMIM9A6NGZ8 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM9A6NGZ8 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM9A6NGZ8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC18.46■□□□□ 0.55
SMIM9A6NGZ8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SMIM9A6NGZ8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.46■□□□□ 0.55
SMIM9A6NGZ8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SMIM9A6NGZ8 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SMIM9A6NGZ8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
SMIM9A6NGZ8 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM9A6NGZ8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM9A6NGZ8 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SMIM9A6NGZ8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.44■□□□□ 0.54
SMIM9A6NGZ8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SMIM9A6NGZ8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC18.44■□□□□ 0.54
SMIM9A6NGZ8 PVT1-219ENST00000523427 938 ntTSL 3 BASIC18.44■□□□□ 0.54
SMIM9A6NGZ8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.43■□□□□ 0.54
SMIM9A6NGZ8 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMIM9A6NGZ8 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.43■□□□□ 0.54
SMIM9A6NGZ8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMIM9A6NGZ8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SMIM9A6NGZ8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SMIM9A6NGZ8 MIR3648-2-201ENST00000581792 180 ntBASIC18.43■□□□□ 0.54
SMIM9A6NGZ8 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.43■□□□□ 0.54
SMIM9A6NGZ8 MIR3648-1-201ENST00000615959 180 ntBASIC18.43■□□□□ 0.54
SMIM9A6NGZ8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.43■□□□□ 0.54
SMIM9A6NGZ8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SMIM9A6NGZ8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SMIM9A6NGZ8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMIM9A6NGZ8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.42■□□□□ 0.54
SMIM9A6NGZ8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SMIM9A6NGZ8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SMIM9A6NGZ8 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM9A6NGZ8 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SMIM9A6NGZ8 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.4■□□□□ 0.54
SMIM9A6NGZ8 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM9A6NGZ8 HES6-205ENST00000409356 528 ntTSL 2 BASIC18.4■□□□□ 0.54
SMIM9A6NGZ8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SMIM9A6NGZ8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.4■□□□□ 0.54
SMIM9A6NGZ8 ABCB10P3-201ENST00000561950 2166 ntBASIC18.4■□□□□ 0.54
SMIM9A6NGZ8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
SMIM9A6NGZ8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.39■□□□□ 0.54
SMIM9A6NGZ8 AC110285.7-201ENST00000624417 1536 ntBASIC18.39■□□□□ 0.54
SMIM9A6NGZ8 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.39■□□□□ 0.53
SMIM9A6NGZ8 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC18.39■□□□□ 0.53
SMIM9A6NGZ8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.39■□□□□ 0.53
SMIM9A6NGZ8 CR559946.2-201ENST00000623684 991 ntBASIC18.39■□□□□ 0.53
SMIM9A6NGZ8 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SMIM9A6NGZ8 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM9A6NGZ8 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM9A6NGZ8 AC008813.1-201ENST00000536597 885 ntBASIC18.38■□□□□ 0.53
SMIM9A6NGZ8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SMIM9A6NGZ8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SMIM9A6NGZ8 AC100797.4-201ENST00000631653 1827 ntBASIC18.37■□□□□ 0.53
SMIM9A6NGZ8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms