Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
TBC1D3FA6NER0 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.75■■□□□ 1.71
TBC1D3FA6NER0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TBC1D3FA6NER0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
TBC1D3FA6NER0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
TBC1D3FA6NER0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.74■■□□□ 1.71
TBC1D3FA6NER0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.73■■□□□ 1.71
TBC1D3FA6NER0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
TBC1D3FA6NER0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
TBC1D3FA6NER0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
TBC1D3FA6NER0 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.71■■□□□ 1.71
TBC1D3FA6NER0 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.71■■□□□ 1.71
TBC1D3FA6NER0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
TBC1D3FA6NER0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
TBC1D3FA6NER0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
TBC1D3FA6NER0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
TBC1D3FA6NER0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.69■■□□□ 1.7
TBC1D3FA6NER0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
TBC1D3FA6NER0 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.69■■□□□ 1.7
TBC1D3FA6NER0 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.68■■□□□ 1.7
TBC1D3FA6NER0 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
TBC1D3FA6NER0 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.68■■□□□ 1.7
TBC1D3FA6NER0 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.68■■□□□ 1.7
TBC1D3FA6NER0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC25.68■■□□□ 1.7
TBC1D3FA6NER0 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC25.68■■□□□ 1.7
TBC1D3FA6NER0 AC008813.1-201ENST00000536597 885 ntBASIC25.67■■□□□ 1.7
TBC1D3FA6NER0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
TBC1D3FA6NER0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
TBC1D3FA6NER0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TBC1D3FA6NER0 AC110285.7-201ENST00000624417 1536 ntBASIC25.66■■□□□ 1.7
TBC1D3FA6NER0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TBC1D3FA6NER0 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TBC1D3FA6NER0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TBC1D3FA6NER0 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TBC1D3FA6NER0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TBC1D3FA6NER0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TBC1D3FA6NER0 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.65■■□□□ 1.7
TBC1D3FA6NER0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TBC1D3FA6NER0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC25.64■■□□□ 1.7
TBC1D3FA6NER0 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TBC1D3FA6NER0 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TBC1D3FA6NER0 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TBC1D3FA6NER0 ST7-AS1-201ENST00000456775 1889 ntBASIC25.62■■□□□ 1.69
TBC1D3FA6NER0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
TBC1D3FA6NER0 GPX1-201ENST00000419349 1106 ntBASIC25.62■■□□□ 1.69
TBC1D3FA6NER0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
TBC1D3FA6NER0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.62■■□□□ 1.69
TBC1D3FA6NER0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TBC1D3FA6NER0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TBC1D3FA6NER0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.61■■□□□ 1.69
TBC1D3FA6NER0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.61■■□□□ 1.69
TBC1D3FA6NER0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TBC1D3FA6NER0 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
TBC1D3FA6NER0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
TBC1D3FA6NER0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
TBC1D3FA6NER0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TBC1D3FA6NER0 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC25.6■■□□□ 1.69
TBC1D3FA6NER0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.59■■□□□ 1.69
TBC1D3FA6NER0 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TBC1D3FA6NER0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TBC1D3FA6NER0 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TBC1D3FA6NER0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TBC1D3FA6NER0 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TBC1D3FA6NER0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
TBC1D3FA6NER0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
TBC1D3FA6NER0 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
TBC1D3FA6NER0 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC25.58■■□□□ 1.69
TBC1D3FA6NER0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.57■■□□□ 1.68
TBC1D3FA6NER0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TBC1D3FA6NER0 ST7-202ENST00000323984 2142 ntTSL 5 BASIC25.57■■□□□ 1.68
TBC1D3FA6NER0 ST7-207ENST00000393449 2127 ntTSL 5 BASIC25.57■■□□□ 1.68
TBC1D3FA6NER0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TBC1D3FA6NER0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TBC1D3FA6NER0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
TBC1D3FA6NER0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
TBC1D3FA6NER0 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
TBC1D3FA6NER0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.57■■□□□ 1.68
TBC1D3FA6NER0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
TBC1D3FA6NER0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.56■■□□□ 1.68
TBC1D3FA6NER0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
TBC1D3FA6NER0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
TBC1D3FA6NER0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.56■■□□□ 1.68
TBC1D3FA6NER0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.55■■□□□ 1.68
TBC1D3FA6NER0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TBC1D3FA6NER0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
TBC1D3FA6NER0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.55■■□□□ 1.68
TBC1D3FA6NER0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.55■■□□□ 1.68
TBC1D3FA6NER0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
TBC1D3FA6NER0 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
TBC1D3FA6NER0 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
TBC1D3FA6NER0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.54■■□□□ 1.68
TBC1D3FA6NER0 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.54■■□□□ 1.68
TBC1D3FA6NER0 AC022413.1-201ENST00000624602 984 ntBASIC25.54■■□□□ 1.68
TBC1D3FA6NER0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TBC1D3FA6NER0 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TBC1D3FA6NER0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.53■■□□□ 1.68
TBC1D3FA6NER0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.53■■□□□ 1.68
TBC1D3FA6NER0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
TBC1D3FA6NER0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
TBC1D3FA6NER0 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms