Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV4S1A1TA0A5B7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TCRBV4S1A1TA0A5B7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.54■□□□□ 0.88
TCRBV4S1A1TA0A5B7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV4S1A1TA0A5B7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TCRBV4S1A1TA0A5B7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV4S1A1TA0A5B7 AL139393.2-201ENST00000608721 2025 ntBASIC20.53■□□□□ 0.88
TCRBV4S1A1TA0A5B7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TCRBV4S1A1TA0A5B7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC20.53■□□□□ 0.88
TCRBV4S1A1TA0A5B7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TCRBV4S1A1TA0A5B7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TCRBV4S1A1TA0A5B7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC20.51■□□□□ 0.87
TCRBV4S1A1TA0A5B7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV4S1A1TA0A5B7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.51■□□□□ 0.87
TCRBV4S1A1TA0A5B7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV4S1A1TA0A5B7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TCRBV4S1A1TA0A5B7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TCRBV4S1A1TA0A5B7 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
TCRBV4S1A1TA0A5B7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.49■□□□□ 0.87
TCRBV4S1A1TA0A5B7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.49■□□□□ 0.87
TCRBV4S1A1TA0A5B7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV4S1A1TA0A5B7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV4S1A1TA0A5B7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV4S1A1TA0A5B7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV4S1A1TA0A5B7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV4S1A1TA0A5B7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TCRBV4S1A1TA0A5B7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV4S1A1TA0A5B7 LINC01971-201ENST00000617888 1048 ntBASIC20.47■□□□□ 0.87
TCRBV4S1A1TA0A5B7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV4S1A1TA0A5B7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
TCRBV4S1A1TA0A5B7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
TCRBV4S1A1TA0A5B7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.45■□□□□ 0.86
TCRBV4S1A1TA0A5B7 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV4S1A1TA0A5B7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TCRBV4S1A1TA0A5B7 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV4S1A1TA0A5B7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TCRBV4S1A1TA0A5B7 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.44■□□□□ 0.86
TCRBV4S1A1TA0A5B7 DUX4L11-201ENST00000611504 1267 ntBASIC20.44■□□□□ 0.86
TCRBV4S1A1TA0A5B7 DUX4L12-201ENST00000614593 1267 ntBASIC20.44■□□□□ 0.86
TCRBV4S1A1TA0A5B7 DUX4L14-201ENST00000621227 1267 ntBASIC20.44■□□□□ 0.86
TCRBV4S1A1TA0A5B7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
TCRBV4S1A1TA0A5B7 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV4S1A1TA0A5B7 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.43■□□□□ 0.86
TCRBV4S1A1TA0A5B7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.43■□□□□ 0.86
TCRBV4S1A1TA0A5B7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.43■□□□□ 0.86
TCRBV4S1A1TA0A5B7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.43■□□□□ 0.86
TCRBV4S1A1TA0A5B7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TCRBV4S1A1TA0A5B7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV4S1A1TA0A5B7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV4S1A1TA0A5B7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.42■□□□□ 0.86
TCRBV4S1A1TA0A5B7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.42■□□□□ 0.86
TCRBV4S1A1TA0A5B7 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
TCRBV4S1A1TA0A5B7 AC010864.1-201ENST00000609407 1511 ntBASIC20.42■□□□□ 0.86
TCRBV4S1A1TA0A5B7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.42■□□□□ 0.86
TCRBV4S1A1TA0A5B7 DRD5P2-201ENST00000421395 2012 ntBASIC20.41■□□□□ 0.86
TCRBV4S1A1TA0A5B7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.41■□□□□ 0.86
TCRBV4S1A1TA0A5B7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV4S1A1TA0A5B7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
TCRBV4S1A1TA0A5B7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.41■□□□□ 0.86
TCRBV4S1A1TA0A5B7 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.41■□□□□ 0.86
TCRBV4S1A1TA0A5B7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
TCRBV4S1A1TA0A5B7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV4S1A1TA0A5B7 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV4S1A1TA0A5B7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
TCRBV4S1A1TA0A5B7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.4■□□□□ 0.86
TCRBV4S1A1TA0A5B7 MIR3648-2-201ENST00000581792 180 ntBASIC20.4■□□□□ 0.86
TCRBV4S1A1TA0A5B7 MIR3648-1-201ENST00000615959 180 ntBASIC20.4■□□□□ 0.86
TCRBV4S1A1TA0A5B7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
TCRBV4S1A1TA0A5B7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
TCRBV4S1A1TA0A5B7 AC016575.1-201ENST00000607026 382 ntBASIC20.39■□□□□ 0.85
TCRBV4S1A1TA0A5B7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV4S1A1TA0A5B7 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
TCRBV4S1A1TA0A5B7 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV4S1A1TA0A5B7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
TCRBV4S1A1TA0A5B7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.38■□□□□ 0.85
TCRBV4S1A1TA0A5B7 MIR639-201ENST00000384974 98 ntBASIC20.38■□□□□ 0.85
TCRBV4S1A1TA0A5B7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
TCRBV4S1A1TA0A5B7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.37■□□□□ 0.85
TCRBV4S1A1TA0A5B7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.37■□□□□ 0.85
TCRBV4S1A1TA0A5B7 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.37■□□□□ 0.85
TCRBV4S1A1TA0A5B7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.36■□□□□ 0.85
TCRBV4S1A1TA0A5B7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV4S1A1TA0A5B7 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
TCRBV4S1A1TA0A5B7 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
TCRBV4S1A1TA0A5B7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
TCRBV4S1A1TA0A5B7 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
TCRBV4S1A1TA0A5B7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.35■□□□□ 0.85
TCRBV4S1A1TA0A5B7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
TCRBV4S1A1TA0A5B7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TCRBV4S1A1TA0A5B7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.34■□□□□ 0.85
TCRBV4S1A1TA0A5B7 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
TCRBV4S1A1TA0A5B7 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TCRBV4S1A1TA0A5B7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TCRBV4S1A1TA0A5B7 CR559946.2-201ENST00000623684 991 ntBASIC20.33■□□□□ 0.85
TCRBV4S1A1TA0A5B7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
TCRBV4S1A1TA0A5B7 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV4S1A1TA0A5B7 MIR4449-201ENST00000578365 66 ntBASIC20.32■□□□□ 0.84
TCRBV4S1A1TA0A5B7 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV4S1A1TA0A5B7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV4S1A1TA0A5B7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms