Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC18.14■□□□□ 0.49
TRBV27A0A0K0K1C4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV27A0A0K0K1C4 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV27A0A0K0K1C4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC18.13■□□□□ 0.49
TRBV27A0A0K0K1C4 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV27A0A0K0K1C4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV27A0A0K0K1C4 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV27A0A0K0K1C4 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV27A0A0K0K1C4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
TRBV27A0A0K0K1C4 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.12■□□□□ 0.49
TRBV27A0A0K0K1C4 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRBV27A0A0K0K1C4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV27A0A0K0K1C4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV27A0A0K0K1C4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV27A0A0K0K1C4 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
TRBV27A0A0K0K1C4 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV27A0A0K0K1C4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.11■□□□□ 0.49
TRBV27A0A0K0K1C4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.11■□□□□ 0.49
TRBV27A0A0K0K1C4 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
TRBV27A0A0K0K1C4 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV27A0A0K0K1C4 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV27A0A0K0K1C4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV27A0A0K0K1C4 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV27A0A0K0K1C4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRBV27A0A0K0K1C4 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV27A0A0K0K1C4 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.09■□□□□ 0.49
TRBV27A0A0K0K1C4 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV27A0A0K0K1C4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRBV27A0A0K0K1C4 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV27A0A0K0K1C4 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV27A0A0K0K1C4 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRBV27A0A0K0K1C4 AC135731.1-201ENST00000569415 2548 ntBASIC18.08■□□□□ 0.49
TRBV27A0A0K0K1C4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.08■□□□□ 0.48
TRBV27A0A0K0K1C4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.07■□□□□ 0.48
TRBV27A0A0K0K1C4 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV27A0A0K0K1C4 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV27A0A0K0K1C4 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV27A0A0K0K1C4 AC127502.1-201ENST00000399971 1502 ntBASIC18.07■□□□□ 0.48
TRBV27A0A0K0K1C4 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
TRBV27A0A0K0K1C4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC18.06■□□□□ 0.48
TRBV27A0A0K0K1C4 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC18.06■□□□□ 0.48
TRBV27A0A0K0K1C4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV27A0A0K0K1C4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBV27A0A0K0K1C4 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV27A0A0K0K1C4 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV27A0A0K0K1C4 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV27A0A0K0K1C4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TRBV27A0A0K0K1C4 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV27A0A0K0K1C4 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC18.05■□□□□ 0.48
TRBV27A0A0K0K1C4 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV27A0A0K0K1C4 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC18.05■□□□□ 0.48
TRBV27A0A0K0K1C4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV27A0A0K0K1C4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV27A0A0K0K1C4 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.04■□□□□ 0.48
TRBV27A0A0K0K1C4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRBV27A0A0K0K1C4 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV27A0A0K0K1C4 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.03■□□□□ 0.48
TRBV27A0A0K0K1C4 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV27A0A0K0K1C4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC18.03■□□□□ 0.48
TRBV27A0A0K0K1C4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV27A0A0K0K1C4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV27A0A0K0K1C4 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV27A0A0K0K1C4 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV27A0A0K0K1C4 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TRBV27A0A0K0K1C4 AL449106.1-201ENST00000608517 1980 ntBASIC18.02■□□□□ 0.47
TRBV27A0A0K0K1C4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
TRBV27A0A0K0K1C4 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.02■□□□□ 0.47
TRBV27A0A0K0K1C4 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV27A0A0K0K1C4 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV27A0A0K0K1C4 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV27A0A0K0K1C4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV27A0A0K0K1C4 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
TRBV27A0A0K0K1C4 AC100797.4-201ENST00000631653 1827 ntBASIC18■□□□□ 0.47
TRBV27A0A0K0K1C4 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV27A0A0K0K1C4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV27A0A0K0K1C4 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC18■□□□□ 0.47
TRBV27A0A0K0K1C4 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV27A0A0K0K1C4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TRBV27A0A0K0K1C4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV27A0A0K0K1C4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV27A0A0K0K1C4 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV27A0A0K0K1C4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV27A0A0K0K1C4 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV27A0A0K0K1C4 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV27A0A0K0K1C4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
TRBV27A0A0K0K1C4 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV27A0A0K0K1C4 AP002414.2-202ENST00000590929 1450 ntBASIC17.98■□□□□ 0.47
TRBV27A0A0K0K1C4 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV27A0A0K0K1C4 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV27A0A0K0K1C4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV27A0A0K0K1C4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV27A0A0K0K1C4 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV27A0A0K0K1C4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV27A0A0K0K1C4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV27A0A0K0K1C4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV27A0A0K0K1C4 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV27A0A0K0K1C4 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TRBV27A0A0K0K1C4 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV27A0A0K0K1C4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV27A0A0K0K1C4 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms