Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV12-3A0A0B4J271 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAV12-3A0A0B4J271 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV12-3A0A0B4J271 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV12-3A0A0B4J271 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAV12-3A0A0B4J271 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV12-3A0A0B4J271 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV12-3A0A0B4J271 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV12-3A0A0B4J271 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV12-3A0A0B4J271 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV12-3A0A0B4J271 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV12-3A0A0B4J271 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV12-3A0A0B4J271 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV12-3A0A0B4J271 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV12-3A0A0B4J271 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAV12-3A0A0B4J271 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV12-3A0A0B4J271 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
TRAV12-3A0A0B4J271 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV12-3A0A0B4J271 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV12-3A0A0B4J271 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV12-3A0A0B4J271 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.9■□□□□ 0.62
TRAV12-3A0A0B4J271 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV12-3A0A0B4J271 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV12-3A0A0B4J271 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV12-3A0A0B4J271 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.89■□□□□ 0.61
TRAV12-3A0A0B4J271 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
TRAV12-3A0A0B4J271 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV12-3A0A0B4J271 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV12-3A0A0B4J271 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV12-3A0A0B4J271 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV12-3A0A0B4J271 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC18.88■□□□□ 0.61
TRAV12-3A0A0B4J271 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRAV12-3A0A0B4J271 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV12-3A0A0B4J271 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
TRAV12-3A0A0B4J271 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV12-3A0A0B4J271 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV12-3A0A0B4J271 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRAV12-3A0A0B4J271 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.87■□□□□ 0.61
TRAV12-3A0A0B4J271 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV12-3A0A0B4J271 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV12-3A0A0B4J271 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV12-3A0A0B4J271 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV12-3A0A0B4J271 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV12-3A0A0B4J271 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV12-3A0A0B4J271 AC108673.1-201ENST00000510422 1159 ntBASIC18.86■□□□□ 0.61
TRAV12-3A0A0B4J271 DUX4L28-201ENST00000623687 678 ntBASIC18.86■□□□□ 0.61
TRAV12-3A0A0B4J271 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRAV12-3A0A0B4J271 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
TRAV12-3A0A0B4J271 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC18.85■□□□□ 0.61
TRAV12-3A0A0B4J271 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV12-3A0A0B4J271 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV12-3A0A0B4J271 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV12-3A0A0B4J271 AC100797.4-201ENST00000631653 1827 ntBASIC18.85■□□□□ 0.61
TRAV12-3A0A0B4J271 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV12-3A0A0B4J271 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRAV12-3A0A0B4J271 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.85■□□□□ 0.61
TRAV12-3A0A0B4J271 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV12-3A0A0B4J271 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.84■□□□□ 0.61
TRAV12-3A0A0B4J271 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV12-3A0A0B4J271 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV12-3A0A0B4J271 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV12-3A0A0B4J271 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV12-3A0A0B4J271 MIR3665-201ENST00000578708 105 ntBASIC18.83■□□□□ 0.6
TRAV12-3A0A0B4J271 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV12-3A0A0B4J271 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TRAV12-3A0A0B4J271 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.83■□□□□ 0.6
TRAV12-3A0A0B4J271 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV12-3A0A0B4J271 PROC-203ENST00000409048 1586 ntTSL 5 BASIC18.82■□□□□ 0.6
TRAV12-3A0A0B4J271 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV12-3A0A0B4J271 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
TRAV12-3A0A0B4J271 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV12-3A0A0B4J271 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV12-3A0A0B4J271 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV12-3A0A0B4J271 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
TRAV12-3A0A0B4J271 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV12-3A0A0B4J271 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.81■□□□□ 0.6
TRAV12-3A0A0B4J271 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV12-3A0A0B4J271 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV12-3A0A0B4J271 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV12-3A0A0B4J271 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TRAV12-3A0A0B4J271 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV12-3A0A0B4J271 MIR6090-201ENST00000622481 60 ntBASIC18.8■□□□□ 0.6
TRAV12-3A0A0B4J271 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV12-3A0A0B4J271 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV12-3A0A0B4J271 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TRAV12-3A0A0B4J271 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.79■□□□□ 0.6
TRAV12-3A0A0B4J271 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV12-3A0A0B4J271 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV12-3A0A0B4J271 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV12-3A0A0B4J271 AP006261.1-201ENST00000584783 668 ntBASIC18.78■□□□□ 0.6
TRAV12-3A0A0B4J271 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV12-3A0A0B4J271 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV12-3A0A0B4J271 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAV12-3A0A0B4J271 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.77■□□□□ 0.6
TRAV12-3A0A0B4J271 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TRAV12-3A0A0B4J271 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TRAV12-3A0A0B4J271 BX255925.1-201ENST00000566954 1854 ntBASIC18.77■□□□□ 0.6
TRAV12-3A0A0B4J271 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV12-3A0A0B4J271 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV12-3A0A0B4J271 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms