Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV5A0A0B4J249 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV5A0A0B4J249 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV5A0A0B4J249 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAV5A0A0B4J249 AP004833.2-201ENST00000532228 1454 ntBASIC19.86■□□□□ 0.77
TRAV5A0A0B4J249 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV5A0A0B4J249 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
TRAV5A0A0B4J249 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV5A0A0B4J249 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV5A0A0B4J249 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV5A0A0B4J249 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV5A0A0B4J249 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV5A0A0B4J249 AC127502.1-201ENST00000399971 1502 ntBASIC19.83■□□□□ 0.77
TRAV5A0A0B4J249 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAV5A0A0B4J249 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV5A0A0B4J249 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV5A0A0B4J249 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRAV5A0A0B4J249 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV5A0A0B4J249 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV5A0A0B4J249 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV5A0A0B4J249 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV5A0A0B4J249 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRAV5A0A0B4J249 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC19.81■□□□□ 0.76
TRAV5A0A0B4J249 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV5A0A0B4J249 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.81■□□□□ 0.76
TRAV5A0A0B4J249 SHF-208ENST00000560734 1731 ntTSL 3 BASIC19.81■□□□□ 0.76
TRAV5A0A0B4J249 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV5A0A0B4J249 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV5A0A0B4J249 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV5A0A0B4J249 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.8■□□□□ 0.76
TRAV5A0A0B4J249 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
TRAV5A0A0B4J249 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV5A0A0B4J249 LINC01003-201ENST00000564834 1764 ntBASIC19.8■□□□□ 0.76
TRAV5A0A0B4J249 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV5A0A0B4J249 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV5A0A0B4J249 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV5A0A0B4J249 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV5A0A0B4J249 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAV5A0A0B4J249 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV5A0A0B4J249 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV5A0A0B4J249 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC19.79■□□□□ 0.76
TRAV5A0A0B4J249 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV5A0A0B4J249 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV5A0A0B4J249 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV5A0A0B4J249 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV5A0A0B4J249 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAV5A0A0B4J249 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV5A0A0B4J249 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.77■□□□□ 0.76
TRAV5A0A0B4J249 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
TRAV5A0A0B4J249 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
TRAV5A0A0B4J249 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRAV5A0A0B4J249 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV5A0A0B4J249 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
TRAV5A0A0B4J249 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV5A0A0B4J249 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV5A0A0B4J249 RARRES2P7-201ENST00000567349 469 ntBASIC19.76■□□□□ 0.75
TRAV5A0A0B4J249 SETD8P1-201ENST00000623146 1180 ntBASIC19.76■□□□□ 0.75
TRAV5A0A0B4J249 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV5A0A0B4J249 PKM-203ENST00000389093 2279 ntTSL 5 BASIC19.76■□□□□ 0.75
TRAV5A0A0B4J249 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV5A0A0B4J249 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV5A0A0B4J249 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV5A0A0B4J249 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC19.75■□□□□ 0.75
TRAV5A0A0B4J249 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV5A0A0B4J249 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC19.75■□□□□ 0.75
TRAV5A0A0B4J249 AC100797.4-201ENST00000631653 1827 ntBASIC19.75■□□□□ 0.75
TRAV5A0A0B4J249 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRAV5A0A0B4J249 AC135731.1-201ENST00000569415 2548 ntBASIC19.74■□□□□ 0.75
TRAV5A0A0B4J249 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV5A0A0B4J249 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV5A0A0B4J249 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
TRAV5A0A0B4J249 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV5A0A0B4J249 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV5A0A0B4J249 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
TRAV5A0A0B4J249 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TRAV5A0A0B4J249 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV5A0A0B4J249 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV5A0A0B4J249 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV5A0A0B4J249 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TRAV5A0A0B4J249 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAV5A0A0B4J249 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV5A0A0B4J249 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV5A0A0B4J249 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAV5A0A0B4J249 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV5A0A0B4J249 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAV5A0A0B4J249 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.7■□□□□ 0.74
TRAV5A0A0B4J249 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC19.7■□□□□ 0.74
TRAV5A0A0B4J249 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TRAV5A0A0B4J249 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV5A0A0B4J249 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV5A0A0B4J249 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV5A0A0B4J249 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV5A0A0B4J249 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV5A0A0B4J249 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TRAV5A0A0B4J249 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV5A0A0B4J249 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV5A0A0B4J249 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV5A0A0B4J249 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAV5A0A0B4J249 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV5A0A0B4J249 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms