Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 MIR3665-201ENST00000578708 105 ntBASIC17.91■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.91■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 AC005559.1-201ENST00000589661 871 ntBASIC17.91■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.9■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.9■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC17.89■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV8-3A0A0A6YYJ7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC17.89■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.88■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.87■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC17.86■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV8-3A0A0A6YYJ7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC17.8■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.79■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 DUX4L28-201ENST00000623687 678 ntBASIC17.78■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV8-3A0A0A6YYJ7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 AL162393.1-201ENST00000437852 946 ntBASIC17.76■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV8-3A0A0A6YYJ7 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms