Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC187A0A096LP49 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
CCDC187A0A096LP49 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC187A0A096LP49 NTF6A-201ENST00000591175 560 ntBASIC24.64■■□□□ 1.54
CCDC187A0A096LP49 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
CCDC187A0A096LP49 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCDC187A0A096LP49 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.53
CCDC187A0A096LP49 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC187A0A096LP49 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC187A0A096LP49 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
CCDC187A0A096LP49 AC135983.2-203ENST00000454486 1613 ntBASIC24.63■■□□□ 1.53
CCDC187A0A096LP49 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CCDC187A0A096LP49 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.62■■□□□ 1.53
CCDC187A0A096LP49 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
CCDC187A0A096LP49 WHAMMP2-203ENST00000563942 1603 ntBASIC24.61■■□□□ 1.53
CCDC187A0A096LP49 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
CCDC187A0A096LP49 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.61■■□□□ 1.53
CCDC187A0A096LP49 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CCDC187A0A096LP49 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.6■■□□□ 1.53
CCDC187A0A096LP49 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.59■■□□□ 1.53
CCDC187A0A096LP49 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CCDC187A0A096LP49 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.59■■□□□ 1.53
CCDC187A0A096LP49 AC012354.3-201ENST00000623734 483 ntBASIC24.59■■□□□ 1.53
CCDC187A0A096LP49 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
CCDC187A0A096LP49 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC187A0A096LP49 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CCDC187A0A096LP49 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.57■■□□□ 1.52
CCDC187A0A096LP49 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC187A0A096LP49 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CCDC187A0A096LP49 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.56■■□□□ 1.52
CCDC187A0A096LP49 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
CCDC187A0A096LP49 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC187A0A096LP49 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC187A0A096LP49 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC187A0A096LP49 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC187A0A096LP49 AC110285.7-201ENST00000624417 1536 ntBASIC24.54■■□□□ 1.52
CCDC187A0A096LP49 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC187A0A096LP49 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC187A0A096LP49 AC148477.6-201ENST00000623746 465 ntBASIC24.53■■□□□ 1.52
CCDC187A0A096LP49 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC187A0A096LP49 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
CCDC187A0A096LP49 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CCDC187A0A096LP49 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC187A0A096LP49 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CCDC187A0A096LP49 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.5■■□□□ 1.51
CCDC187A0A096LP49 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.49■■□□□ 1.51
CCDC187A0A096LP49 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
CCDC187A0A096LP49 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.48■■□□□ 1.51
CCDC187A0A096LP49 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC187A0A096LP49 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
CCDC187A0A096LP49 AC060814.1-201ENST00000554326 538 ntBASIC24.48■■□□□ 1.51
CCDC187A0A096LP49 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CCDC187A0A096LP49 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
CCDC187A0A096LP49 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC187A0A096LP49 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CCDC187A0A096LP49 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
CCDC187A0A096LP49 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC187A0A096LP49 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CCDC187A0A096LP49 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.46■■□□□ 1.51
CCDC187A0A096LP49 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.46■■□□□ 1.51
CCDC187A0A096LP49 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CCDC187A0A096LP49 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.45■■□□□ 1.5
CCDC187A0A096LP49 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
CCDC187A0A096LP49 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CCDC187A0A096LP49 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC187A0A096LP49 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCDC187A0A096LP49 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.43■■□□□ 1.5
CCDC187A0A096LP49 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCDC187A0A096LP49 AL135925.1-201ENST00000605920 1701 ntBASIC24.43■■□□□ 1.5
CCDC187A0A096LP49 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.42■■□□□ 1.5
CCDC187A0A096LP49 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.42■■□□□ 1.5
CCDC187A0A096LP49 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
CCDC187A0A096LP49 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC24.42■■□□□ 1.5
CCDC187A0A096LP49 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCDC187A0A096LP49 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC187A0A096LP49 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.41■■□□□ 1.5
CCDC187A0A096LP49 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC187A0A096LP49 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
CCDC187A0A096LP49 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
CCDC187A0A096LP49 U85056.1-201ENST00000616429 682 ntBASIC24.4■■□□□ 1.5
CCDC187A0A096LP49 MIR219A2-201ENST00000608502 1504 ntBASIC24.4■■□□□ 1.5
CCDC187A0A096LP49 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC187A0A096LP49 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
CCDC187A0A096LP49 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
CCDC187A0A096LP49 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC187A0A096LP49 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.39■■□□□ 1.49
CCDC187A0A096LP49 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
CCDC187A0A096LP49 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.39■■□□□ 1.49
CCDC187A0A096LP49 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.49
CCDC187A0A096LP49 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC187A0A096LP49 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC187A0A096LP49 AL033527.3-201ENST00000566366 1196 ntBASIC24.38■■□□□ 1.49
CCDC187A0A096LP49 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CCDC187A0A096LP49 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
CCDC187A0A096LP49 AC018358.1-201ENST00000631079 1402 ntBASIC24.37■■□□□ 1.49
CCDC187A0A096LP49 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
CCDC187A0A096LP49 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC187A0A096LP49 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC187A0A096LP49 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CCDC187A0A096LP49 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.36■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms