Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ZNF549-202ENST00000376233 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 WARS-238ENST00000557135 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 LINC00598-207ENST00000616706 2088 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 FN1-206ENST00000359671 8524 ntTSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 VPS39-201ENST00000318006 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 RPH3A-219ENST00000551052 2961 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 KRT80-201ENST00000313234 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 RAD17-204ENST00000354312 2943 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 SLC9B2-201ENST00000362026 2300 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 SNORA33-201ENST00000363664 130 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 OOEP-201ENST00000370359 478 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 RNU6-882P-201ENST00000391025 103 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 LAMB1-204ENST00000393561 5766 ntTSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 MCF2L-206ENST00000397021 576 ntTSL 2 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AL353151.1-201ENST00000402406 604 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 IP6K2-218ENST00000443964 973 ntTSL 4 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 MRPL51P2-201ENST00000450190 376 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AL132656.1-201ENST00000452173 490 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AC098828.2-201ENST00000452342 573 ntTSL 2 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AC023449.1-201ENST00000454464 154 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 TRAIP-202ENST00000469027 1145 ntTSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AL049747.1-201ENST00000472240 852 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 LSP1P2-201ENST00000479042 133 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 ADAM9-209ENST00000487273 3839 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AC055733.3-201ENST00000505214 523 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AC106774.2-201ENST00000510266 406 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 TOMM22P4-201ENST00000511318 336 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 Y_RNA.666-201ENST00000516187 112 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 snoZ6.1-201ENST00000516391 75 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 RIMBP2-202ENST00000535703 3685 ntTSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AP003170.1-201ENST00000536944 1030 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 ITFG2-AS1-204ENST00000547834 411 ntTSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AC005632.1-201ENST00000550637 576 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 FAM181A-AS1-201ENST00000554538 545 ntTSL 4 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 LINC02301-202ENST00000555150 428 ntTSL 3 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 CA5AP1-201ENST00000568175 576 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 SAT2-208ENST00000573566 640 ntTSL 2 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 MIR3163-201ENST00000581592 73 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 RN7SL468P-201ENST00000582256 294 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AC005828.4-201ENST00000584608 552 ntTSL 4 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AC090241.1-201ENST00000587732 621 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AC008738.2-201ENST00000593041 404 ntTSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AC011465.1-201ENST00000599092 328 ntTSL 3 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AL356423.1-201ENST00000604953 538 ntBASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 TEX28-201ENST00000610938 1233 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 CDK10-222ENST00000625631 140 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 CCDC163-207ENST00000629482 953 ntAPPRIS P5 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 RNF111-202ENST00000557998 4803 ntTSL 2 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 RPH3A-201ENST00000389385 4679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 TWNK-202ENST00000370228 3175 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF827-208ENST00000513320 3165 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 ASH2L-207ENST00000521652 2433 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 AP000356.2-201ENST00000639904 4634 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF587B-203ENST00000594901 2118 ntAPPRIS P1 TSL 4 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 BBS9-201ENST00000242067 4027 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 KIAA1324-203ENST00000369939 3442 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 MYOM2-201ENST00000262113 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 CCDC88A-207ENST00000436346 9811 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 LINC00943-203ENST00000535544 2815 ntTSL 2 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 HNRNPA1-203ENST00000546500 4121 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 MYO7A-201ENST00000409619 7106 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 SMCR8-201ENST00000406438 8279 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 TMEM255A-201ENST00000309720 3394 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 SHPRH-201ENST00000275233 6649 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 MROH7-201ENST00000339553 3459 ntTSL 5 BASIC5.27□□□□□ -1.57
KRTAP3-3Q9BYR6 FAM35CP-201ENST00000554755 2470 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AP001094.2-201ENST00000578897 2315 ntBASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 FBXO10-202ENST00000432825 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 BCL2L13-215ENST00000611738 4817 ntTSL 4 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 GTF2H3-214ENST00000618160 3252 ntTSL 5 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 UNC45A-216ENST00000639885 3255 ntTSL 5 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 KDM2A-212ENST00000530342 3651 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 KIAA0895-202ENST00000317020 4241 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 RPGR-203ENST00000378505 4767 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 TIA1-203ENST00000415783 4633 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 SPX-201ENST00000256969 2269 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 MTMR3-203ENST00000351488 4464 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 DNHD1-202ENST00000354685 3205 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 SERPINA1-201ENST00000355814 3236 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 ARHGEF3-201ENST00000296315 3602 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 AC011365.1-201ENST00000522615 3478 ntTSL 2 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 MOV10L1-210ENST00000545383 3889 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 C4orf50-201ENST00000324058 5201 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
KRTAP3-3Q9BYR6 ZC4H2-201ENST00000337990 2363 ntTSL 2 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 221.8 ms