RNA–Protein interactions for RNA: ENST00000551052.5

RPH3A-219, Transcript of rabphilin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPH3A, Length 2,961 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-219ENST00000551052 NISCHQ9Y2I1 1504 aa21.68■■□□□ 1.06
RPH3A-219ENST00000551052 SHROOM4Q9ULL8 1493 aa18.67■□□□□ 0.58
RPH3A-219ENST00000551052 DCAF8L2P0C7V8 631 aa18.46■□□□□ 0.55
RPH3A-219ENST00000551052 CCDC180Q9P1Z9 1646 aa18.38■□□□□ 0.53
RPH3A-219ENST00000551052 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
RPH3A-219ENST00000551052 SUPT5HO00267 1087 aaKnown RBP18.16■□□□□ 0.5
RPH3A-219ENST00000551052 ABCC9O60706 1549 aa17.62■□□□□ 0.41
RPH3A-219ENST00000551052 DCAF1Q9Y4B6 1507 aa17.59■□□□□ 0.41
RPH3A-219ENST00000551052 SCRIBQ14160 1630 aa17.48■□□□□ 0.39
RPH3A-219ENST00000551052 CHIC1Q5VXU3 224 aa17.38■□□□□ 0.37
RPH3A-219ENST00000551052 PCGF6Q9BYE7 350 aa17.29■□□□□ 0.36
RPH3A-219ENST00000551052 MYO15BQ96JP2 1530 aa17.29■□□□□ 0.36
RPH3A-219ENST00000551052 PPARGC1BQ86YN6 1023 aaKnown RBP17.25■□□□□ 0.35
RPH3A-219ENST00000551052 HRCP23327 699 aa17.18■□□□□ 0.34
RPH3A-219ENST00000551052 RSF1Q96T23 1441 aaPredicted RBP17.13■□□□□ 0.33
RPH3A-219ENST00000551052 NACADO15069 1562 aa17.11■□□□□ 0.33
RPH3A-219ENST00000551052 CECR2Q9BXF3 1484 aa17.09■□□□□ 0.33
RPH3A-219ENST00000551052 LOC105371045A0A1W2PR82 267 aa17.02■□□□□ 0.31
RPH3A-219ENST00000551052 RB1CC1Q8TDY2 1594 aa16.95■□□□□ 0.3
RPH3A-219ENST00000551052 MROH2BQ7Z745 1585 aa16.94■□□□□ 0.3
RPH3A-219ENST00000551052 PABPN1Q86U42 306 aaKnown RBP eCLIP16.91■□□□□ 0.3
RPH3A-219ENST00000551052 EHMT2Q96KQ7 1210 aa16.89■□□□□ 0.29
RPH3A-219ENST00000551052 FAM9AQ8IZU1 332 aaPredicted RBP16.86■□□□□ 0.29
RPH3A-219ENST00000551052 WIZO95785 1651 aa16.84■□□□□ 0.29
RPH3A-219ENST00000551052 TRIM41Q8WV44 630 aa16.8■□□□□ 0.28
RPH3A-219ENST00000551052 UNC13AQ9UPW8 1703 aa16.74■□□□□ 0.27
RPH3A-219ENST00000551052 BAZ1AQ9NRL2 1556 aaPredicted RBP16.63■□□□□ 0.25
RPH3A-219ENST00000551052 BICRAQ9NZM4 1560 aa16.56■□□□□ 0.24
RPH3A-219ENST00000551052 SMARCA4P51532 1647 aa16.56■□□□□ 0.24
RPH3A-219ENST00000551052 CCDC88BA6NC98 1476 aa16.48■□□□□ 0.23
RPH3A-219ENST00000551052 TRIM26Q12899 539 aaPredicted RBP16.46■□□□□ 0.23
RPH3A-219ENST00000551052 ABCC8Q09428 1581 aa16.44■□□□□ 0.22
RPH3A-219ENST00000551052 TOP2AP11388 1531 aaKnown RBP16.44■□□□□ 0.22
RPH3A-219ENST00000551052 SMARCA2P51531 1590 aa16.4■□□□□ 0.22
RPH3A-219ENST00000551052 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
RPH3A-219ENST00000551052 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
RPH3A-219ENST00000551052 SOGA1O94964 1423 aa16.24■□□□□ 0.19
RPH3A-219ENST00000551052 TTBK1Q5TCY1 1321 aaPredicted RBP16.24■□□□□ 0.19
RPH3A-219ENST00000551052 ATAD2BQ9ULI0 1458 aa16.24■□□□□ 0.19
RPH3A-219ENST00000551052 RUSC2Q8N2Y8 1516 aa16.21■□□□□ 0.19
RPH3A-219ENST00000551052 BAZ1BQ9UIG0 1483 aaKnown RBP16.19■□□□□ 0.18
RPH3A-219ENST00000551052 PEG3Q9GZU2 1588 aa16.13■□□□□ 0.17
RPH3A-219ENST00000551052 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.11■□□□□ 0.17
RPH3A-219ENST00000551052 ZEB1P37275 1124 aaPredicted RBP16.1■□□□□ 0.17
RPH3A-219ENST00000551052 UBTFP17480 764 aaKnown RBP16.09■□□□□ 0.17
RPH3A-219ENST00000551052 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.17
RPH3A-219ENST00000551052 RANGAP1P46060 587 aaPredicted RBP16.07■□□□□ 0.16
RPH3A-219ENST00000551052 CSRNP3Q8WYN3 585 aa16.06■□□□□ 0.16
RPH3A-219ENST00000551052 SYNJ1O43426 1573 aa16.04■□□□□ 0.16
RPH3A-219ENST00000551052 PELP1Q8IZL8 1130 aaKnown RBP16.01■□□□□ 0.15
RPH3A-219ENST00000551052 CCER1Q8TC90 406 aaPredicted RBP16.01■□□□□ 0.15
RPH3A-219ENST00000551052 NEUROD1Q13562 356 aa15.96■□□□□ 0.15
RPH3A-219ENST00000551052 CEP162Q5TB80 1403 aa15.96■□□□□ 0.15
RPH3A-219ENST00000551052 GTF3C3Q9Y5Q9 886 aa15.9■□□□□ 0.14
RPH3A-219ENST00000551052 NCAPD3P42695 1498 aa15.89■□□□□ 0.13
RPH3A-219ENST00000551052 YTHDC1Q96MU7 727 aaKnown RBP15.89■□□□□ 0.13
RPH3A-219ENST00000551052 TNIKQ9UKE5 1360 aa15.87■□□□□ 0.13
RPH3A-219ENST00000551052 ACIN1Q9UKV3 1341 aaKnown RBP15.86■□□□□ 0.13
RPH3A-219ENST00000551052 GOLGA3Q08378 1498 aa15.83■□□□□ 0.13
RPH3A-219ENST00000551052 EEA1Q15075 1411 aa15.83■□□□□ 0.12
RPH3A-219ENST00000551052 DIEXFQ68CQ4 756 aaKnown RBP15.82■□□□□ 0.12
RPH3A-219ENST00000551052 RAPGEF2Q9Y4G8 1499 aa15.81■□□□□ 0.12
RPH3A-219ENST00000551052 HMGXB3Q12766 1538 aa15.81■□□□□ 0.12
RPH3A-219ENST00000551052 CUX1P39880 1505 aa15.76■□□□□ 0.11
RPH3A-219ENST00000551052 TOP2BQ02880 1626 aa15.76■□□□□ 0.11
RPH3A-219ENST00000551052 CEP164Q9UPV0 1460 aa15.76■□□□□ 0.11
RPH3A-219ENST00000551052 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
RPH3A-219ENST00000551052 CC2D2AQ9P2K1 1620 aa15.73■□□□□ 0.11
RPH3A-219ENST00000551052 CFTRP13569 1480 aa15.73■□□□□ 0.11
RPH3A-219ENST00000551052 CLIP1P30622 1438 aa15.72■□□□□ 0.11
RPH3A-219ENST00000551052 CENPBP07199 599 aaPredicted RBP15.7■□□□□ 0.1
RPH3A-219ENST00000551052 KIF21BO75037 1637 aa15.67■□□□□ 0.1
RPH3A-219ENST00000551052 BIVM-ERCC5R4GMW8 1640 aa15.66■□□□□ 0.1
RPH3A-219ENST00000551052 HNRNPUL2Q1KMD3 747 aaKnown RBP15.65■□□□□ 0.1
RPH3A-219ENST00000551052 CADPSQ9ULU8 1353 aa15.65■□□□□ 0.1
RPH3A-219ENST00000551052 NESP48681 1621 aa15.63■□□□□ 0.09
RPH3A-219ENST00000551052 KIF27Q86VH2 1401 aa15.58■□□□□ 0.08
RPH3A-219ENST00000551052 APLP2Q06481 763 aa15.58■□□□□ 0.08
RPH3A-219ENST00000551052 CUX2O14529 1486 aa15.57■□□□□ 0.08
RPH3A-219ENST00000551052 PRXQ9BXM0 1461 aa15.57■□□□□ 0.08
RPH3A-219ENST00000551052 VPS8Q8N3P4 1428 aa15.56■□□□□ 0.08
RPH3A-219ENST00000551052 FGD5Q6ZNL6 1462 aa15.53■□□□□ 0.08
RPH3A-219ENST00000551052 MYT1Q01538 1121 aa15.52■□□□□ 0.08
RPH3A-219ENST00000551052 KANK4Q5T7N3 995 aaPredicted RBP15.52■□□□□ 0.07
RPH3A-219ENST00000551052 FANCD2Q9BXW9 1451 aa15.52■□□□□ 0.07
RPH3A-219ENST00000551052 P3H3Q8IVL6 736 aa15.51■□□□□ 0.07
RPH3A-219ENST00000551052 RAD54L2Q9Y4B4 1467 aa15.5■□□□□ 0.07
RPH3A-219ENST00000551052 IGF1RP08069 1367 aa15.5■□□□□ 0.07
RPH3A-219ENST00000551052 ARAP1Q96P48 1450 aa15.49■□□□□ 0.07
RPH3A-219ENST00000551052 MIER1Q8N108 512 aa15.48■□□□□ 0.07
RPH3A-219ENST00000551052 ZNF316A6NFI3 1004 aaPredicted RBP15.45■□□□□ 0.06
RPH3A-219ENST00000551052 ERICH3Q5RHP9 1530 aa15.44■□□□□ 0.06
RPH3A-219ENST00000551052 PRDM2Q13029 1718 aa15.44■□□□□ 0.06
RPH3A-219ENST00000551052 CARMIL1Q5VZK9 1371 aa15.43■□□□□ 0.06
RPH3A-219ENST00000551052 ATP1B4Q9UN42 357 aaPredicted RBP15.42■□□□□ 0.06
RPH3A-219ENST00000551052 ITGAEP38570 1179 aa15.41■□□□□ 0.06
RPH3A-219ENST00000551052 ARHGAP35Q9NRY4 1499 aa15.4■□□□□ 0.06
RPH3A-219ENST00000551052 POLA1P09884 1462 aaPredicted RBP15.37■□□□□ 0.05
RPH3A-219ENST00000551052 TOPBP1Q92547 1522 aa15.37■□□□□ 0.05
RPH3A-219ENST00000551052 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms