RNA–Protein interactions for RNA: ENST00000615443.1

CHM-205, Transcript of CHM, Rab escort protein 1, humanhuman

TSL 1 (best) BASIC

Gene CHM, Length 2,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHM-205ENST00000615443 AEBP2Q6ZN18 517 aaPredicted RBP11.57□□□□□ -0.56
CHM-205ENST00000615443 CHIC1Q5VXU3 224 aa11.4□□□□□ -0.58
CHM-205ENST00000615443 SENP3Q9H4L4 574 aaPredicted RBP10.54□□□□□ -0.72
CHM-205ENST00000615443 POTEDQ86YR6 584 aa10.25□□□□□ -0.77
CHM-205ENST00000615443 PHF23Q9BUL5 403 aaPredicted RBP10□□□□□ -0.81
CHM-205ENST00000615443 MSH5O43196 834 aa9.69□□□□□ -0.86
CHM-205ENST00000615443 FOXD1Q16676 465 aa9.52□□□□□ -0.89
CHM-205ENST00000615443 PIAS4Q8N2W9 510 aaPredicted RBP8.76□□□□□ -1.01
CHM-205ENST00000615443 CACNB1Q02641 598 aaPredicted RBP8.45□□□□□ -1.06
CHM-205ENST00000615443 PLPPR3Q6T4P5 718 aa8.34□□□□□ -1.07
CHM-205ENST00000615443 DMRT2Q9Y5R5 561 aa8.18□□□□□ -1.1
CHM-205ENST00000615443 SCAF1Q9H7N4 1312 aaKnown RBP8.12□□□□□ -1.11
CHM-205ENST00000615443 PPP6R1Q9UPN7 881 aa8.08□□□□□ -1.12
CHM-205ENST00000615443 ADRA2BP18089 450 aa8.07□□□□□ -1.12
CHM-205ENST00000615443 C1QBPQ07021 282 aaKnown RBP8.02□□□□□ -1.12
CHM-205ENST00000615443 DNAJC5BQ9UF47 199 aa8.02□□□□□ -1.12
CHM-205ENST00000615443 RNF39Q9H2S5 420 aa7.94□□□□□ -1.14
CHM-205ENST00000615443 POTEHQ6S545 545 aa7.94□□□□□ -1.14
CHM-205ENST00000615443 HOXD11P31277 338 aaPredicted RBP7.64□□□□□ -1.19
CHM-205ENST00000615443 MAPK8IP2Q13387 824 aaPredicted RBP7.53□□□□□ -1.2
CHM-205ENST00000615443 DCAF8L1A6NGE4 600 aa7.49□□□□□ -1.21
CHM-205ENST00000615443 RNF216Q9NWF9 866 aaPredicted RBP7.42□□□□□ -1.22
CHM-205ENST00000615443 CNKSR2Q8WXI2 1034 aa7.28□□□□□ -1.24
CHM-205ENST00000615443 SLC24A1O60721 1099 aa7.28□□□□□ -1.24
CHM-205ENST00000615443 APLP2Q06481 763 aa7.28□□□□□ -1.24
CHM-205ENST00000615443 RBM42Q9BTD8 480 aaKnown RBP7.21□□□□□ -1.26
CHM-205ENST00000615443 EHMT2Q96KQ7 1210 aa7.19□□□□□ -1.26
CHM-205ENST00000615443 SP7Q8TDD2 431 aaPredicted RBP7.19□□□□□ -1.26
CHM-205ENST00000615443 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.13□□□□□ -1.27
CHM-205ENST00000615443 DSG3P32926 999 aa7.1□□□□□ -1.27
CHM-205ENST00000615443 PPP4R3CPQ6ZMV5 832 aa7.03□□□□□ -1.28
CHM-205ENST00000615443 CHRDL2Q6WN34 429 aa6.96□□□□□ -1.3
CHM-205ENST00000615443 ZNF219Q9P2Y4 722 aaPredicted RBP6.93□□□□□ -1.3
CHM-205ENST00000615443 NCBP3Q53F19 620 aaKnown RBP6.93□□□□□ -1.3
CHM-205ENST00000615443 CAPN15O75808 1086 aa6.92□□□□□ -1.3
CHM-205ENST00000615443 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.89□□□□□ -1.31
CHM-205ENST00000615443 HNRNPUL2Q1KMD3 747 aaKnown RBP6.89□□□□□ -1.31
CHM-205ENST00000615443 PCDH10Q9P2E7 1040 aa6.84□□□□□ -1.31
CHM-205ENST00000615443 AKT1S1Q96B36 256 aa6.79□□□□□ -1.32
CHM-205ENST00000615443 RTN4Q9NQC3 1192 aaKnown RBP6.79□□□□□ -1.32
CHM-205ENST00000615443 CLCN6P51797 869 aa6.78□□□□□ -1.32
CHM-205ENST00000615443 U3KPZ7 1027 aaPredicted RBP6.77□□□□□ -1.33
CHM-205ENST00000615443 KCNA4P22459 653 aa6.72□□□□□ -1.33
CHM-205ENST00000615443 CSRNP3Q8WYN3 585 aa6.71□□□□□ -1.34
CHM-205ENST00000615443 LHX8Q68G74 356 aa6.7□□□□□ -1.34
CHM-205ENST00000615443 ZBTB12Q9Y330 459 aaPredicted RBP6.68□□□□□ -1.34
CHM-205ENST00000615443 SAMD1Q6SPF0 538 aaPredicted RBP6.67□□□□□ -1.34
CHM-205ENST00000615443 SPINK5Q9NQ38 1064 aaPredicted RBP6.67□□□□□ -1.34
CHM-205ENST00000615443 HAX1O00165 279 aa6.64□□□□□ -1.35
CHM-205ENST00000615443 PLSCR2Q9NRY7 297 aa6.62□□□□□ -1.35
CHM-205ENST00000615443 FXR2P51116 673 aaKnown RBP eCLIP6.61□□□□□ -1.35
CHM-205ENST00000615443 PIP4P2Q8N4L2 257 aa6.59□□□□□ -1.35
CHM-205ENST00000615443 AMER1Q5JTC6 1135 aaPredicted RBP6.57□□□□□ -1.36
CHM-205ENST00000615443 TRHP20396 242 aaPredicted RBP6.52□□□□□ -1.37
CHM-205ENST00000615443 NISCHQ9Y2I1 1504 aa6.52□□□□□ -1.37
CHM-205ENST00000615443 REM2Q8IYK8 340 aaPredicted RBP6.46□□□□□ -1.37
CHM-205ENST00000615443 ABCB7O75027 752 aa6.45□□□□□ -1.38
CHM-205ENST00000615443 C19orf67A6NJJ6 358 aa6.44□□□□□ -1.38
CHM-205ENST00000615443 SLC4A1APQ9BWU0 796 aaKnown RBP6.42□□□□□ -1.38
CHM-205ENST00000615443 PRKCSHP14314 528 aaPredicted RBP6.41□□□□□ -1.38
CHM-205ENST00000615443 DAXXQ9UER7 740 aaPredicted RBP6.38□□□□□ -1.39
CHM-205ENST00000615443 GABBR2O75899 941 aa6.37□□□□□ -1.39
CHM-205ENST00000615443 NPM3O75607 178 aaKnown RBP6.33□□□□□ -1.4
CHM-205ENST00000615443 PITPNM1O00562 1244 aa6.31□□□□□ -1.4
CHM-205ENST00000615443 MAMSTRQ6ZN01 415 aa6.27□□□□□ -1.41
CHM-205ENST00000615443 ZBTB22O15209 634 aa6.26□□□□□ -1.41
CHM-205ENST00000615443 SPDYE1Q8NFV5 336 aaPredicted RBP6.24□□□□□ -1.41
CHM-205ENST00000615443 POLA2Q14181 598 aa6.24□□□□□ -1.41
CHM-205ENST00000615443 POTEMA6NI47 508 aa6.23□□□□□ -1.41
CHM-205ENST00000615443 TIMELESSQ9UNS1 1208 aa6.2□□□□□ -1.42
CHM-205ENST00000615443 POTEGQ6S5H5 508 aa6.2□□□□□ -1.42
CHM-205ENST00000615443 TAOK2Q9UL54 1235 aa6.19□□□□□ -1.42
CHM-205ENST00000615443 SPDYE2BA6NHP3 402 aa6.18□□□□□ -1.42
CHM-205ENST00000615443 MYCNP04198 464 aaPredicted RBP6.18□□□□□ -1.42
CHM-205ENST00000615443 SPDYE6P0CI01 402 aa6.18□□□□□ -1.42
CHM-205ENST00000615443 SPDYE2Q495Y8 402 aa6.18□□□□□ -1.42
CHM-205ENST00000615443 EVX2Q03828 476 aa6.17□□□□□ -1.42
CHM-205ENST00000615443 PRKAR2AP13861 404 aaKnown RBP6.17□□□□□ -1.42
CHM-205ENST00000615443 SLC4A2P04920 1241 aa6.16□□□□□ -1.42
CHM-205ENST00000615443 DCBLD2Q96PD2 775 aa6.14□□□□□ -1.43
CHM-205ENST00000615443 TULP1O00294 542 aaPredicted RBP6.11□□□□□ -1.43
CHM-205ENST00000615443 ARXQ96QS3 562 aa6.1□□□□□ -1.43
CHM-205ENST00000615443 TPRNQ4KMQ1 711 aa6.1□□□□□ -1.43
CHM-205ENST00000615443 BCANQ96GW7 911 aa6.1□□□□□ -1.43
CHM-205ENST00000615443 PLCB2Q00722 1185 aa6.09□□□□□ -1.43
CHM-205ENST00000615443 ZNF579Q8NAF0 562 aaKnown RBP6.04□□□□□ -1.44
CHM-205ENST00000615443 POTEIP0CG38 1075 aa6.04□□□□□ -1.44
CHM-205ENST00000615443 HAP1P54257 671 aaPredicted RBP6.03□□□□□ -1.44
CHM-205ENST00000615443 OTUD5Q96G74 571 aa6.03□□□□□ -1.44
CHM-205ENST00000615443 FKBP8Q14318 412 aa6.01□□□□□ -1.45
CHM-205ENST00000615443 FBLN2P98095 1184 aa5.99□□□□□ -1.45
CHM-205ENST00000615443 OSCARQ8IYS5 282 aa5.97□□□□□ -1.45
CHM-205ENST00000615443 CD44P16070 742 aaKnown RBP5.96□□□□□ -1.46
CHM-205ENST00000615443 C7P10643 843 aa5.95□□□□□ -1.46
CHM-205ENST00000615443 SLC39A7Q92504 469 aa5.95□□□□□ -1.46
CHM-205ENST00000615443 SCUBE2Q9NQ36 999 aa5.95□□□□□ -1.46
CHM-205ENST00000615443 HOMEZQ8IX15 550 aa5.93□□□□□ -1.46
CHM-205ENST00000615443 GTF3C3Q9Y5Q9 886 aa5.91□□□□□ -1.46
CHM-205ENST00000615443 PRR29P0C7W0 189 aa5.89□□□□□ -1.47
CHM-205ENST00000615443 SSUH2Q9Y2M2 353 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms