Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
MS4A3Q96HJ5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 TNXA-203ENST00000507684 2038 ntBASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 AC013410.2-201ENST00000422627 201 ntBASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 AC097658.1-201ENST00000475555 843 ntBASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 ETFRF1-209ENST00000556885 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 AC083880.1-201ENST00000608266 535 ntBASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 AC024933.1-201ENST00000608472 348 ntBASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 AC073578.4-201ENST00000623945 514 ntBASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 MFSD8-213ENST00000641134 1327 ntBASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.62■□□□□ 0.41
MS4A3Q96HJ5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 HLA-F-220ENST00000434407 884 ntBASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 C2orf69P4-201ENST00000565394 541 ntBASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.61■□□□□ 0.41
MS4A3Q96HJ5 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 LETM1P2-201ENST00000597330 2178 ntBASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 LINC02270-202ENST00000515691 541 ntTSL 3 BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 AP001442.1-203ENST00000596385 876 ntTSL 5 BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MS4A3Q96HJ5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MS4A3Q96HJ5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
MS4A3Q96HJ5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.59■□□□□ 0.41
MS4A3Q96HJ5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
MS4A3Q96HJ5 AC092720.2-201ENST00000602388 1665 ntBASIC17.59■□□□□ 0.41
MS4A3Q96HJ5 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MS4A3Q96HJ5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
MS4A3Q96HJ5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.59■□□□□ 0.41
MS4A3Q96HJ5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.59■□□□□ 0.41
MS4A3Q96HJ5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.59■□□□□ 0.41
MS4A3Q96HJ5 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms